TrackVisTractHeader

java.lang.Object

mgui.io.foreign.trackvis.TrackVisTractHeader

public class TrackVisTractHeader
extends java.lang.Object

Data structure for a TrackVis tract file header. See http://www.trackvis.org/docs/?subsect=fileformat.

Author:: Andrew Reid

Field Summary

Fields
Modifier and Type	Field	Description
`short[]`	`dim`
`int`	`hdr_size`
`char[]`	`id_string`
`float[]`	`image_orientation_patient`
`byte`	`invert_x`
`byte`	`invert_y`
`byte`	`invert_z`
`int`	`n_count`
`short`	`n_properties`
`short`	`n_scalars`
`float[]`	`origin`
`char[]`	`pad1`
`char[]`	`pad2`
`char[][]`	`property_name`
`char[][]`	`scalar_name`
`byte`	`swap_xy`
`byte`	`swap_yz`
`byte`	`swap_zx`
`int`	`version`
`char[]`	`voxel_order`
`float[]`	`voxel_size`

Constructor Summary

Constructors

Constructor Description

TrackVisTractHeader()
Method Summary

Modifier and Type Method Description

void readHeader(java.io.File file)

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details
- id_string
  
  public char[] id_string
- dim
  
  public short[] dim
- voxel_size
  
  public float[] voxel_size
- origin
  
  public float[] origin
- n_scalars
  
  public short n_scalars
- scalar_name
  
  public char[][] scalar_name
- n_properties
  
  public short n_properties
- property_name
  
  public char[][] property_name
- voxel_order
  
  public char[] voxel_order
- pad2
  
  public char[] pad2
- image_orientation_patient
  
  public float[] image_orientation_patient
- pad1
  
  public char[] pad1
- invert_x
  
  public byte invert_x
- invert_y
  
  public byte invert_y
- invert_z
  
  public byte invert_z
- swap_xy
  
  public byte swap_xy
- swap_yz
  
  public byte swap_yz
- swap_zx
  
  public byte swap_zx
- n_count
  
  public int n_count
- version
  
  public int version
- hdr_size
  
  public int hdr_size
Constructor Details
- TrackVisTractHeader
  
  public TrackVisTractHeader()
Method Details
- readHeader
  
  public void readHeader(java.io.File file) throws java.io.IOException
  
  Throws:
  
  java.io.IOException