Package mgui.neuro.components

Class AbstractAxon

java.lang.Object

mgui.interfaces.AbstractInterfaceObject

mgui.models.networks.components.AbstractNetworkComponent

mgui.neuro.components.AbstractNeuroComponent

mgui.neuro.components.AbstractNeuronalComponent

mgui.neuro.components.AbstractAxon

All Implemented Interfaces:

java.lang.Cloneable, java.lang.Comparable<DynamicModelComponent>, AttributeListener, AttributeObject, InterfaceObject, NamedObject, TreeObject, CleanableObject, DynamicModelComponent, TimeStepListener, Updateable, Axon, NeuronalComponent

Direct Known Subclasses:

SimpleAxon

public abstract class AbstractAxon
extends AbstractNeuronalComponent
implements Axon

Default class for an axon. An axon can be connected to any number of synapses.

Version:

1.0

Author:

Andrew Reid

Field Summary

Fields

Modifier and Type	Field	Description
java.util.ArrayList<Synapse>	synapses

Fields inherited from class mgui.neuro.components.AbstractNeuronalComponent

parent

Fields inherited from class mgui.neuro.components.AbstractNeuroComponent

attributes, clock, connections, events, hasSubComponents, id, listeners, solver, updated

Fields inherited from class mgui.interfaces.AbstractInterfaceObject

isDestroyed, tree_nodes

Constructor Summary

Constructors

Constructor	Description
AbstractAxon()

Method Summary

Modifier and Type	Method	Description
void	connectSynapse(Synapse s)
void	disconnectAll()
void	disconnectSynapse(Synapse s)
java.util.ArrayList<DynamicModelComponent>	getSubComponents()	Returns a list of the complete subcomponent tree.
java.util.ArrayList<Synapse>	getSynapses()
protected void	init()
void	setTreeNode(InterfaceTreeNode treeNode)	Sets the children for this node's InterfaceTreeNode.
java.lang.String	toString()

Methods inherited from class mgui.neuro.components.AbstractNeuronalComponent

clone, getParent, setParent

Methods inherited from class mgui.neuro.components.AbstractNeuroComponent

addConnection, addEvent, addListener, addToEngine, attributeUpdated, compareTo, executeEvent, executeEvents, fireListeners, fireListeners, getAttribute, getAttributes, getConnections, getDelay, getID, getName, getODESolver, getRate, getSolver, hasSubComponents, removeConnection, removeListener, reset, resetClock, setAttribute, setAttributes, setDelay, setID, setID, setName, setODESolver, setSolver, setSolver, timeElapsed, updateComponent, updateFromClock

Methods inherited from class mgui.models.networks.components.AbstractNetworkComponent

getAttributeValue

Methods inherited from class mgui.interfaces.AbstractInterfaceObject

clean, destroy, getTreeLabel, isDestroyed, issueTreeNode, updateTreeNodes

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface mgui.interfaces.util.CleanableObject

clean

Methods inherited from interface java.lang.Comparable

compareTo

Methods inherited from interface mgui.models.dynamic.DynamicModelComponent

addConnection, addEvent, addToEngine, clone, executeEvents, getID, hasSubComponents, removeConnection, reset, setID, setID

Methods inherited from interface mgui.interfaces.InterfaceObject

destroy, isDestroyed

Methods inherited from interface mgui.interfaces.NamedObject

getName, setName

Methods inherited from interface mgui.models.dynamic.TimeStepListener

timeElapsed

Methods inherited from interface mgui.interfaces.trees.TreeObject

getTreeLabel, issueTreeNode

Field Details

synapses

public java.util.ArrayList<Synapse> synapses

Constructor Details

AbstractAxon

public AbstractAxon()

Method Details

init

protected void init()

Overrides:

init in class AbstractNeuroComponent

connectSynapse

public void connectSynapse(Synapse s)
                    throws NeuroException

Specified by:

connectSynapse in interface Axon

Throws:

NeuroException

disconnectSynapse

public void disconnectSynapse(Synapse s)

Specified by:

disconnectSynapse in interface Axon

getSynapses

public java.util.ArrayList<Synapse> getSynapses()

Specified by:

getSynapses in interface Axon

disconnectAll

public void disconnectAll()

setTreeNode

public void setTreeNode(InterfaceTreeNode treeNode)

Description copied from interface: TreeObject

Sets the children for this node's InterfaceTreeNode.

Specified by:

setTreeNode in interface TreeObject

Overrides:

setTreeNode in class AbstractInterfaceObject

getSubComponents

public java.util.ArrayList<DynamicModelComponent> getSubComponents()

Description copied from class: AbstractNeuroComponent

Returns a list of the complete subcomponent tree. Subclasses containing subcomponents should override this and provide an enumeration of all subcomponents, also calling this method for each subcomponent to ensure a complete tree is returned.

Specified by:

getSubComponents in interface DynamicModelComponent

Overrides:

getSubComponents in class AbstractNeuroComponent

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object