Uses of Interface
mgui.interfaces.ProgressUpdater

Packages that use ProgressUpdater

Package	Description
au.edu.unsw.cse
mgui.datasources	This package contains the core classes for data source functionality.
mgui.geometry	Provides 2D and 3D geometry representations and utilities for all shapes used in ModelGUI.
mgui.geometry.mesh	Provides classes representing and operating on 3D mesh shapes.
mgui.geometry.neuro.mesh
mgui.geometry.util	Uility classes for geometric operations.
mgui.geometry.volume	Provides classes for representing and operating on 3D volume shapes.
mgui.image.util	Utility classes for operations on 2D and 3D images.
mgui.interfaces	This package contains all main/abstract interface objects (object which provides user interations) for ModelGUI.
mgui.interfaces.attributes	Provides a standard updatable attribute object which can fire events for all interface objects.
mgui.interfaces.console	Provides an interactive system console (currently view only).
mgui.interfaces.datasources	This package provides interface objects which allow the user to interface with the core data source classes.
mgui.interfaces.graphics	Provides graphical windows for user interaction with model objects.
mgui.interfaces.graphics.util	Utility classes operating on 2D and 3D graphics objects.
mgui.interfaces.graphics.video	Provides classes to generate videos from graphics windows.
mgui.interfaces.graphs	Provides an interface for user interaction with graph objects.
mgui.interfaces.gui
mgui.interfaces.layouts
mgui.interfaces.maps	Provides a set a maps for use by ModelGUI objects.
mgui.interfaces.math	Provides an abstract interface allowing arithmetic functions to be applied to object data (e.g., vertex data for shapes).
mgui.interfaces.pipelines.libraries
mgui.interfaces.plots	Provides 2D and 3D plotting functionality.
mgui.interfaces.projects	Provides an interface for projects, which specify file/URL organization and I/O operations
mgui.interfaces.projects.util	Utility classes operating on projects.
mgui.interfaces.shapes	This package provides interfaces for user interaction with shapes and shape models.
mgui.interfaces.shapes.selection
mgui.interfaces.shapes.util
mgui.interfaces.shapes.volume
mgui.interfaces.tables	Provides object interaction via a JTable.
mgui.interfaces.util	Utility classes for general operations.
mgui.interfaces.variables
mgui.interfaces.xml
mgui.io	This package contains all classes which perform input/output functions.
mgui.io.domestic	Input/output operations for "domestic" (mgui-specific) data formats.
mgui.io.domestic.datasources
mgui.io.domestic.graphs
mgui.io.domestic.maps
mgui.io.domestic.network
mgui.io.domestic.pipelines
mgui.io.domestic.printing
mgui.io.domestic.shapes
mgui.io.domestic.shapes.xml
mgui.io.domestic.variables
mgui.io.domestic.videos
mgui.io.domestic.views
mgui.io.foreign.amira
mgui.io.foreign.camino
mgui.io.foreign.caret
mgui.io.foreign.duff
mgui.io.foreign.freesurfer
mgui.io.foreign.fsl
mgui.io.foreign.interfile
mgui.io.foreign.minc
mgui.io.foreign.pajek
mgui.io.foreign.vol
mgui.io.foreign.wavefront
mgui.io.foreign.wunil
mgui.io.standard.gifti
mgui.io.standard.imaging
mgui.io.standard.json
mgui.io.standard.nifti
mgui.io.standard.xml
mgui.io.util	Utility classes for performing input/output operations.
mgui.neuro.graphs
mgui.neuro.imaging.camino
mgui.numbers
mgui.pipelines	Provides a framework for defining and running processing pipelines in the ModelGUI environment.
mgui.util

Uses of ProgressUpdater in au.edu.unsw.cse

Methods in au.edu.unsw.cse with parameters of type ProgressUpdater

Modifier and Type	Method	Description
protected Object3dList	DivideAndConquer.build(int first, int last, ProgressUpdater progress, int pos)	recursive build
Object3dList	DivideAndConquer.build(ProgressUpdater progress)
Object3dList	GiftWrap.build(ProgressUpdater progress)
abstract Object3dList	HullAlgorithm.build(ProgressUpdater updater)
Object3dList	Incremental.build(ProgressUpdater progress)
Object3dList	QuickHull.build(ProgressUpdater progress)

Uses of ProgressUpdater in mgui.datasources

Methods in mgui.datasources with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	DataConnection.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	DataConnection.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	DataField.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	DataField.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	DataQuery.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	DataQuery.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	DataSource.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	DataSource.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	DataTable.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	DataTable.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	DataTableSet.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	DataTableSet.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.geometry

Methods in mgui.geometry with parameters of type ProgressUpdater

Modifier and Type	Method	Description
protected void	Grid3D.writeCoords(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
protected void	Plane3D.writeCoords(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
protected void	Shape3D.writeCoords(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)	Writes this shape's coordinates, according the parameters in options
void	Graph3D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	Grid3D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	Mesh3D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	Plane3D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	Shape2D.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	Shape2D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	Shape3D.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	Shape3D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.geometry.mesh

Methods in mgui.geometry.mesh with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	MeshEngine.callMethod(java.lang.String operation, java.lang.String method, java.util.ArrayList<?> params, ProgressUpdater progress)
boolean	MeshEngine.callMethod(java.lang.String operation, java.lang.String method, ProgressUpdater progress)
boolean	MeshEngine.computeMeanCurvature(Mesh3DInt mesh3d, ProgressUpdater progress)	Computes the vertex-wise mean curvature of this mesh and stores it in the "target_column" specified it the "Mean Curvature" attributes.
static boolean	MeshFunctions.computeVertexWiseCurvature(Mesh3DInt mesh3D, java.lang.String target_column, ProgressUpdater progress)	Computes the curvature of a mesh at each of its nodes, as the magnitude of the sum of surface normals of the triangles of which it is a node.
static Mesh3D	MeshFunctions.getConvexHull(Mesh3D mesh, java.lang.String method, ProgressUpdater progress)	Returns a new mesh which is the convex hull of the given mesh.
static Mesh3D	MeshFunctions.getConvexHull(Mesh3D mesh, ProgressUpdater progress)
static java.util.ArrayList<java.util.ArrayList<java.lang.Integer>>	MeshFunctions.getIntersectingFaces(Mesh3D mesh_1, Mesh3D mesh_2, float search_max, ProgressUpdater progress)	Returns two lists of face indices indicating which faces intersect between mesh1 and mesh2.
static java.util.ArrayList<java.util.ArrayList<java.lang.Integer>>	MeshFunctions.getIntersectingFacesBlocking(Mesh3D mesh_1, Mesh3D mesh_2, float search_max, ProgressUpdater progress)	Returns two lists of face indices indicating which faces intersect between mesh1 and mesh2.
void	MeshEngine.getMeshParts(Mesh3DInt mesh_int, ShapeSet3DInt shape_set, boolean copy_data, ProgressUpdater progress)	Creates new mesh objects as a set of non-contiguous meshes from mesh_int, and adds these to shape_set.
static java.util.ArrayList<Mesh3D>	MeshFunctions.getMeshParts(Mesh3D mesh, java.util.HashMap<java.lang.String,java.util.ArrayList<MguiNumber>> old_data, java.util.ArrayList<java.util.HashMap<java.lang.String,java.util.ArrayList<MguiNumber>>> parts_data, ProgressUpdater updater)	Returns a set of non-contiguous meshes from mesh.
static java.util.ArrayList<java.lang.Integer>	MeshFunctions.getSelfIntersections(Mesh3D mesh, float search_max, ProgressUpdater progress)
protected static java.util.ArrayList<java.lang.Integer>	MeshFunctions.getSelfIntersectionsBlocking(Mesh3D mesh, float search_max, ProgressUpdater progress)	Returns a list of face indices indicating which faces intersect within mesh.
static java.util.ArrayList<MguiNumber>	MeshFunctions.getVertexWiseCurvature(Mesh3D mesh, ProgressUpdater progress)	Computes the mean curvature at each node in the mesh.
static java.util.ArrayList<MguiNumber>	MeshFunctions.getVertexWiseCurvature_bak(Mesh3D mesh, ProgressUpdater progress)	Computes the mean curvature at each node in the mesh.
void	MeshEngine.inflateMesh(Mesh3DInt mesh, java.lang.String method, ProgressUpdater progress)
static Mesh3D	MeshFunctions.inflateMeshTRP(Mesh3DInt mesh3D, double lambda, double beta, long max_itr, ProgressUpdater progress)	Inflate this mesh using the TRP method.
static Mesh3D	MeshInflation.inflateMeshTRP(Mesh3DInt mesh3D, double lambda, double beta, long max_itr, ProgressUpdater progress)	Inflates a given mesh, by relaxing its vertices towards the mean of its neighbours, as described by:
void	MeshEngine.inflateTRP(Mesh3DInt mesh, ProgressUpdater progress)
static Volume3DInt	MeshFunctions.mapMeshToVolumeGaussian(Mesh3DInt mesh_int, Volume3DInt volume, java.lang.String mesh_column, java.lang.String grid_channel, double sigma_normal, double sigma_tangent, double sigma_max_normal, double sigma_max_tangent, boolean normalize, boolean is_discrete, ProgressUpdater progress)	Projects vertex-wise data from a given Mesh3DInt data column to a Grid3D channel, normal and transverse (tangent) Gaussian functions.
static java.util.ArrayList<MguiNumber>	MeshFunctions.mapVolumeToMeshEV(Mesh3D mesh, Volume3DInt volume, java.lang.String column, double no_value, float radius, int stat, ProgressUpdater progress)	Maps the values in channel of grid, an instance of Grid3D, to the vertices of mesh, using a containing-voxel(s) approach.
static java.util.ArrayList<MguiNumber>	MeshFunctions.mapVolumeToMeshEV(Mesh3D mesh, Volume3DInt volume, java.lang.String column, double no_value, ProgressUpdater progress)	Maps the values in channel of grid, an instance of Grid3D, to the vertices of mesh, using a containing-voxel approach.
protected static java.util.ArrayList<MguiNumber>	MeshFunctions.mapVolumeToMeshEVBlocking(Mesh3D mesh, Volume3DInt volume, java.lang.String column, double no_value, float radius, int stat, ProgressUpdater progress)	Maps the values in channel of grid, an instance of Grid3D, to the vertices of mesh, using a containing-voxel(s) approach.
static java.util.ArrayList<MguiNumber>	MeshFunctions.mapVolumeToMeshGaussian(Mesh3D mesh, Volume3DInt volume, java.lang.String channel, double sigma_normal, double sigma_tangent, double sigma_max_normal, double sigma_max_tangent, java.lang.String setSigmaT, boolean normalize, ProgressUpdater progress, boolean output_matrix, double normal_set_max_sigma, double tangent_set_max_sigma, java.lang.String matrix_file)	Maps values from a Grid3D object to a mesh object by applying a Gaussian kernal to voxels in the vicinity of each mesh vertex.
static void	MeshFunctions.selectFloodFill(Mesh3D mesh, VertexSelection selection, int seed_node, ProgressUpdater progress)	Selects all nodes surrounding a seed node in a region enclosed by selected nodes; if seed node is not fully enclosed, this will select the entire mesh.
void	MeshEngine.smoothVertexValuesIsotropicGaussian(Mesh3DInt mesh_int, ProgressUpdater progress)	Uses the current parameters for "Smooth vertex values - Isotropic Gaussian" to smooth vertex values with a Gaussian kernel, isotropic in the plane of the surface mesh.
static java.util.ArrayList<MguiNumber>	MeshFunctions.smoothVertexValuesIsotropicGaussian(Mesh3D mesh, java.util.ArrayList<MguiNumber> values, double sigma, double sigma_max, ProgressUpdater progress)	Smooths values with an isotropic Gaussian kernel, along the surface of mesh.
static java.util.ArrayList<MguiNumber>	MeshFunctions.splitRoiWithPlane(Mesh3D mesh, Plane3D plane, java.util.ArrayList<MguiNumber> rois, int roi, int new_roi, ProgressUpdater progress)	Splits the ROI defined by roi into two parts, on either side of plane.
static java.util.ArrayList<MguiNumber>	MeshFunctions.subdivideRois(Mesh3D mesh, java.util.ArrayList<MguiNumber> old_rois, int min_size, int target_rois, int min_roi, int max_roi, ProgressUpdater progress)	Subdivides a mesh into (roughly) equally sized ROIs, with the final number equal or close to target_rois.
static java.util.ArrayList<MguiNumber>	MeshFunctions.subdivideRois(Mesh3D mesh, java.util.ArrayList<MguiNumber> old_rois, int min_size, int target_rois, ProgressUpdater progress)	Subdivides a mesh into (roughly) equally sized ROIs, with the final number equal or close to target_rois.
static java.util.ArrayList<MguiNumber>	MeshFunctions.subdivideRoisBlocking(Mesh3D mesh, java.util.ArrayList<MguiNumber> old_rois, int min_size, int target_rois, int min_roi, int max_roi, ProgressUpdater progress)	Subdivides a mesh into (roughly) equally sized ROIs, with the final number equal or close to target_rois.

Uses of ProgressUpdater in mgui.geometry.neuro.mesh

Methods in mgui.geometry.neuro.mesh with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	NeuroMeshEngine.callMethod(java.lang.String operation, java.lang.String method, java.util.ArrayList<?> params, ProgressUpdater progress)
boolean	NeuroMeshEngine.callMethod(java.lang.String operation, java.lang.String method, ProgressUpdater progress)
static void	NeuroMeshFunctions.getRays(ScalpAndSkullModelOptions options, java.util.ArrayList<SampleRay> rays_1, java.util.ArrayList<SampleRay> rays_2, ProgressUpdater progress)	Generates a set of sample rays from an instance of ScalpAndSkullModelOptions, including a brain hull surface and a T1-weighted brain image.
static void	NeuroMeshFunctions.getRaysBlocking(ScalpAndSkullModelOptions options, java.util.ArrayList<SampleRay> rays_1, java.util.ArrayList<SampleRay> rays_2, ProgressUpdater progress)	Generates and fills three sets of sample rays based upon the parameters in options.
static Mesh3D[]	NeuroMeshFunctions.getSkullAndScalpMeshes(int[][] A, java.util.ArrayList<SampleRay> scalp_rays, java.util.ArrayList<SampleRay> full_rays, ScalpAndSkullModelOptions options, ProgressUpdater updater)	Generates meshes, given the control points; array is ordered as: inner skull outer skull scalp control_point_A1 control_point_A2 control_point_A3 control_point_A4
static Mesh3D[]	NeuroMeshFunctions.getSkullAndScalpMeshesBlocking(int[][] A, java.util.ArrayList<SampleRay> scalp_rays, java.util.ArrayList<SampleRay> full_rays, ScalpAndSkullModelOptions options, ProgressUpdater updater)	Generates meshes, given the control points; array is ordered as: inner skull outer skull scalp control_point_A1 control_point_A2 control_point_A3 control_point_A4 ..and 4 additional meshes for subject control points
Volume3DInt	NeuroMeshEngine.mapCortexToVolume(Mesh3DInt mesh_int, Volume3DInt volume, java.lang.Object thickness, ProgressUpdater progress)	Maps cortical surface values to a volume
java.util.ArrayList<MguiNumber>	NeuroMeshEngine.mapVolumeToCortex(Mesh3D mesh, Volume3DInt volume, java.lang.Object thickness, ProgressUpdater progress)	Maps a volume to a cortical surface
static java.util.ArrayList<MguiNumber>	NeuroMeshFunctions.mapVolumeToCortexGaussian(Mesh3D mesh, Volume3DInt volume, java.lang.String channel, double sigma_normal, double sigma_tangent, double sigma_max_normal, double sigma_max_tangent, java.lang.Object _thickness, boolean normalize, ProgressUpdater progress, boolean output_matrix, java.lang.String matrix_file)	Maps values from a Grid3D object to a mesh object representing a middle cortical surface, by applying a Gaussian kernal to voxels in the vicinity of each mesh vertex.

Uses of ProgressUpdater in mgui.geometry.util

Methods in mgui.geometry.util with parameters of type ProgressUpdater

Modifier and Type	Method	Description
static Mesh3D	ConvexHullFunctions.getConvexHull(java.util.ArrayList<org.jogamp.vecmath.Point3f> nodes, java.lang.String method, ProgressUpdater progress)	Returns a Mesh3D which is the
static boolean	GeometryFunctions.transform(Shape shape, Jama.Matrix matrix, ProgressUpdater progress)	Transforms shape with the given affine transformation Jama matrix matrix.
static boolean	GeometryFunctions.transform(Shape shape, org.jogamp.vecmath.Matrix4d matrix, ProgressUpdater progress)	Transforms shape with the given affine transformation matrix matrix.
static boolean	GeometryFunctions.transform(Shape shape, org.jogamp.vecmath.Matrix4f matrix, ProgressUpdater progress)	Transforms shape with the given affine transformation matrix matrix.

Uses of ProgressUpdater in mgui.geometry.volume

Methods in mgui.geometry.volume with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	VolumeEngine.callMethod(java.lang.String operation, java.lang.String method, java.util.ArrayList<?> params, ProgressUpdater progress)
boolean	VolumeEngine.callMethod(java.lang.String operation, java.lang.String method, ProgressUpdater progress)
static boolean	VolumeFunctions.getBlobsFromVolume(Volume3DInt volume, java.lang.String source_column, java.lang.String target_column, ProgressUpdater progress, int min_blob, double threshold)	Finds connected blobs in a thresholded volume.
static java.util.ArrayList<MguiNumber>	VolumeFunctions.getBlobsFromVolumeBlocking(Volume3DInt volume, java.lang.String column, ProgressUpdater progress, int min_blob, double threshold)	Finds connected blobs in a thresholded volume.
static Volume3DInt	VolumeFunctions.getInvertedVolume(Volume3DInt volume, java.lang.String column, ProgressUpdater progress)	Returns a Grid3D object whose data is the inverse of grid.
static PointSet3DInt	VolumeFunctions.getRoiCentroidsBlocking(Volume3DInt volume, java.lang.String source_column, int[] value_range, int min_size, boolean map_values, java.lang.String label_column, ProgressUpdater progress)	Finds the centroids for all ROIs (identified as voxels with the same value).
org.apache.commons.math3.analysis.interpolation.TricubicSplineInterpolatingFunction	TricubicSplineInterpolaterUpdater.interpolate(double[] xval, double[] yval, double[] zval, double[][][] fval, ProgressUpdater progress)
boolean	VolumeEngine.mapVolumeToVolume(Volume3DInt source, Volume3DInt target, java.lang.String method, ProgressUpdater progress_bar)	Maps a column of source to a column of target, given the attributes corresponding to method.
static boolean	VolumeFunctions.mapVolumeToVolumeEV(Volume3DInt volume_source, Volume3DInt volume_target, java.lang.String column_source, java.lang.String column_target, double default_value, ProgressUpdater progress)	Maps volume_source to volume_target, using the enclosing voxel to assign the value.
static void	VolumeFunctions.mapVolumeToVolumeEV(Volume3DInt volume_source, Volume3DInt volume_target, java.lang.String column_source, java.lang.String column_target, ProgressUpdater progress)	Maps volume_source to volume_target, using the enclosing voxel to assign the value.
protected static boolean	VolumeFunctions.mapVolumeToVolumeEVBlocking(Volume3DInt volume_source, Volume3DInt volume_target, java.lang.String column_source, java.lang.String column_target, double default_value, ProgressUpdater progress)	Maps volume_source to volume_target, using the enclosing voxel to assign the value.
static boolean	VolumeFunctions.mapVolumeToVolumeInterp(Volume3DInt volume_source, Volume3DInt volume_target, java.lang.String column_source, java.lang.String column_target, java.lang.String method, java.util.ArrayList<java.lang.Object> parameters, double default_value, ProgressUpdater progress)	Maps volume_source to volume_target, using interpolation from all overlapping voxels to assign the value.
static void	VolumeFunctions.mapVolumeToVolumeInterp(Volume3DInt volume_source, Volume3DInt volume_target, java.lang.String column_source, java.lang.String column_target, java.lang.String method, java.util.ArrayList<java.lang.Object> parameters, ProgressUpdater progress)	Maps volume_source to volume_target, using interpolation from all overlapping voxels to assign the value.
protected static boolean	VolumeFunctions.mapVolumeToVolumeInterpBlocking(Volume3DInt volume_source, Volume3DInt volume_target, java.lang.String column_source, java.lang.String column_target, java.lang.String method, java.util.ArrayList<java.lang.Object> parameters, double default_value, ProgressUpdater progress)	Maps volume_source to volume_target, using interpolation from all overlapping voxels to assign the value.
static Volume3DInt	VolumeFunctions.performOperationBlocking(Volume3DInt volume, java.lang.Double value, VolumeFunctions.Operation op, ProgressUpdater progress)	Performs the specified operation on one grid and a constant value, and returns and new volume.
static Volume3DInt	VolumeFunctions.performOperationBlocking(Volume3DInt volume1, Volume3DInt volume2, VolumeFunctions.Operation op, ProgressUpdater progress)	Performs the specified operation on the two volumes, and returns the result as a new Grid3D instance.
boolean	VolumeEngine.smoothVolume(Volume3DInt volume, java.lang.String method, ProgressUpdater progress_bar)	Geometrically smooths values from source_column in volume with the smoothing kernel specified by method.
static boolean	VolumeFunctions.smoothVolumeGaussian(Volume3DInt volume, java.lang.String source_column, java.lang.String target_column, double fwhm, double max_radius, ProgressUpdater progress, double default_value)	Geometrically smooths values from source_column in volume with an isotropic Gaussian smoothing kernel with a full-width-at-half-maximum of fwhm.
static boolean	VolumeFunctions.smoothVolumeGaussianBlocking(Volume3DInt volume, java.lang.String source_column, java.lang.String target_column, double fwhm, double max_radius, ProgressUpdater progress, double default_value)	Geometrically smooths values from source_column in volume with an isotropic Gaussian smoothing kernel with a full-width-at-half-maximum of fwhm.

Uses of ProgressUpdater in mgui.image.util

Methods in mgui.image.util with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	WindowedColourModel.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	WindowedColourModel.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces

Methods in mgui.interfaces with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	InterfaceDisplayPanel.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	InterfaceDisplayPanel.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	InterfaceSplitPanel.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	InterfaceTabbedDisplayPanel.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progressBar)
void	InterfaceWorkspace.writeXML(int tab, java.io.Writer writer, ProgressUpdater progressBar)
void	InterfaceWorkspace.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progressBar)

Uses of ProgressUpdater in mgui.interfaces.attributes

Methods in mgui.interfaces.attributes with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	Attribute.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	Attribute.writeXML(int tab, java.io.Writer writer, XMLObject.XMLType type, XMLObject.XMLEncoding format, ProgressUpdater progress_bar)
void	Attribute.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	AttributeList.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	AttributeList.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.console

Methods in mgui.interfaces.console with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	InterfaceConsoleDisplay.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	InterfaceConsoleDisplay.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.datasources

Methods in mgui.interfaces.datasources with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	DataTableModel.setProgressUpdater(ProgressUpdater updater)

Uses of ProgressUpdater in mgui.interfaces.graphics

Methods in mgui.interfaces.graphics with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	InterfaceGraphic.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	InterfaceGraphic2D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	InterfaceGraphic3D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	InterfaceGraphicWindow.writeXML(int tab, java.io.Writer writer, ProgressUpdater progressBar)
void	InterfaceGraphicWindow.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progressBar)
void	View3D.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	View3D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.graphics.util

Methods in mgui.interfaces.graphics.util with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	DrawingEngine.callMethod(java.lang.String operation, java.lang.String method, java.util.ArrayList<?> params, ProgressUpdater progress)
boolean	DrawingEngine.callMethod(java.lang.String operation, java.lang.String method, ProgressUpdater progress)

Uses of ProgressUpdater in mgui.interfaces.graphics.video

Methods in mgui.interfaces.graphics.video with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	Video.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	Video.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	VideoTask.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	VideoTask.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.graphs

Methods in mgui.interfaces.graphs with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	AbstractGraphEdge.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	AbstractGraphEdge.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	AbstractGraphNode.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	AbstractGraphNode.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	InterfaceAbstractGraph.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	InterfaceAbstractGraph.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	InterfaceGraphDisplay.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.gui

Classes in mgui.interfaces.gui that implement ProgressUpdater

Modifier and Type	Class	Description
class	AbstractProgressUpdater	An abstract updater with default implementations for all methods
class	InterfaceProgressBar	Panel to be used as a progress bar for all operations which require one.

Uses of ProgressUpdater in mgui.interfaces.layouts

Methods in mgui.interfaces.layouts with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	InterfaceLayoutWindow.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	LayoutItem.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	LayoutItem.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.maps

Methods in mgui.interfaces.maps with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	Camera3D.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	Camera3D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	ColourMap.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	ColourMap.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	Map2D.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	Map2D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	Map3D.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	Map3D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	NameMap.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	NameMap.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.math

Methods in mgui.interfaces.math with parameters of type ProgressUpdater

Modifier and Type	Method	Description
static java.lang.Object	MathExpression.evaluate(MathExpressionOptions options, ProgressUpdater updater)	Evaluates a mathematical expression, returning an array of doubles, if n < 3, otherwise returns a set of embedded ArrayList<Double>s.
static java.lang.Object	MathExpression.evaluate_conditional(MathExpressionOptions options, ProgressUpdater updater)	Evaluates a conditional expression, returning an array of booleans.
static boolean[]	MathExpression.evaluate1b(org.cheffo.jeplite.JEP jep, VariableObject variable, int n, java.util.ArrayList<java.lang.String> used_variables, ProgressUpdater updater)
static double[]	MathExpression.evaluate1d(org.cheffo.jeplite.JEP jep, VariableObject variable, int n, java.util.ArrayList<java.lang.String> used_variables, ProgressUpdater updater)
static boolean[][]	MathExpression.evaluate2b(org.cheffo.jeplite.JEP jep, VariableObject variable, int m, int n, java.util.ArrayList<java.lang.String> used_variables, ProgressUpdater updater)
static double[][]	MathExpression.evaluate2d(org.cheffo.jeplite.JEP jep, VariableObject variable, int m, int n, java.util.ArrayList<java.lang.String> used_variables, ProgressUpdater updater)
static boolean[][][]	MathExpression.evaluate3b(org.cheffo.jeplite.JEP jep, VariableObject variable, int m, int n, int o, java.util.ArrayList<java.lang.String> used_variables, ProgressUpdater updater)
static double[][][]	MathExpression.evaluate3d(org.cheffo.jeplite.JEP jep, VariableObject variable, int m, int n, int o, java.util.ArrayList<java.lang.String> used_variables, ProgressUpdater updater)

Uses of ProgressUpdater in mgui.interfaces.pipelines.libraries

Methods in mgui.interfaces.pipelines.libraries with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	PipelineProcessLibrary.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	PipelineProcessLibrary.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.plots

Methods in mgui.interfaces.plots with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	InterfacePlotDisplay.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.projects

Methods in mgui.interfaces.projects with parameters of type ProgressUpdater

Modifier and Type	Method	Description
java.lang.Object	InterfaceProject.loadDataInstance(java.lang.String instance, java.lang.Integer series, ProjectDataItem item, ProgressUpdater progress)	Attempts to load a data instance with the given data item specification.
java.lang.Object	InterfaceProject.loadDataInstance(java.lang.String instance, ProjectDataItem item, ProgressUpdater progress)	Attempts to load a data instance with the given data item specification.
void	InterfaceProject.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	InterfaceProject.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	ProjectDirectory.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	ProjectDirectory.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	ProjectInstance.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	ProjectInstance.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.projects.util

Methods in mgui.interfaces.projects.util with parameters of type ProgressUpdater

Modifier and Type	Method	Description
static boolean	ProjectFunctions.consolidateDirectories(java.util.HashMap<java.lang.String,java.lang.Object> parameters, ProgressUpdater progress)	Consolidates the contents of a set of directories into a single directory.

Uses of ProgressUpdater in mgui.interfaces.shapes

Methods in mgui.interfaces.shapes with parameters of type ProgressUpdater

Modifier and Type	Method	Description
protected void	Volume3DInt.writeFullXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
protected void	Shape2DInt.writeShapeToXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar, XMLObject.XMLType type)
void	InterfaceShape.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	InterfaceShape.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	SectionSet3DInt.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	Shape2DInt.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	ShapeModel3D.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	ShapeModel3D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	ShapeModel3D.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar, java.io.File root_dir)	Writes this model to an XML writer, setting the specified root directory.
void	ShapeSet3DInt.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	VertexDataColumn.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	VertexDataColumn.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	Volume3DInt.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.shapes.selection

Methods in mgui.interfaces.shapes.selection with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	ShapeSelectionSet.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	ShapeSelectionSet.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.shapes.util

Methods in mgui.interfaces.shapes.util with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	ShapeEngine.callMethod(java.lang.String operation, java.lang.String method, java.util.ArrayList<?> params, ProgressUpdater progress)
boolean	ShapeEngine.callMethod(java.lang.String operation, java.lang.String method, ProgressUpdater progress)
boolean	ShapeEngine.computeConvexHull(Shape3DInt shape, java.lang.String method, ProgressUpdater progress)	Computes a convex hull for shape.
static Mesh3D	ShapeFunctions.getConvexHull(Shape3DInt shape, java.lang.String method, ProgressUpdater progress)	Returns a new mesh which is the convex hull of the given mesh.
static Mesh3D	ShapeFunctions.getConvexHull(Shape3DInt shape, ProgressUpdater progress)
protected static Mesh3D	ShapeFunctions.getConvexHullBlocking(Shape3DInt shape, java.lang.String method, ProgressUpdater progress)
boolean	ShapeEngine.normalizeColumn(InterfaceShape shape, ProgressUpdater progress)	Normalizes the values in a column.
boolean	ShapeEngine.normalizeColumnWithMask(InterfaceShape shape, ProgressUpdater progress)	Normalize values in source_column by the statistic of values in normalize_column which lie in the mask mask_column.
boolean	ShapeEngine.transformShape3D(Shape3DInt shape, java.lang.String method, ProgressUpdater progress)	Transforms shape according to method.
static Shape3D	ShapeFunctions.transformWithMatrix(Shape3D shape_in, org.jogamp.vecmath.Matrix4d matrix, ProgressUpdater progress)	Transform shape_in with matrix and returns the result.
protected static Shape3D	ShapeFunctions.transformWithMatrixBlocking(Shape3D shape_in, org.jogamp.vecmath.Matrix4d matrix, ProgressUpdater progress)	Transform shape_in with matrix and returns the result.

Uses of ProgressUpdater in mgui.interfaces.shapes.volume

Methods in mgui.interfaces.shapes.volume with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	InterfaceVolumePanel.loadVolume(Volume3DInt volume, java.lang.String column, VolumeFileLoader loader, VolumeInputOptions options, ProgressUpdater progress_bar)
java.util.ArrayList<MguiNumber>	VolumeMetadata.readVolume(int t, DataType data_type, ProgressUpdater progress)	Reads the 3D volume at voxel dimension t.
void	GridVertexDataColumn.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
protected void	GridVertexDataColumn.writeXMLFull(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.tables

Methods in mgui.interfaces.tables with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	InterfaceDataTable.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.util

Methods in mgui.interfaces.util with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	Engine.callMethod(java.lang.String operation, java.lang.String method, java.util.ArrayList<?> params, ProgressUpdater progress)	Calls the specified operation/method pair.
boolean	Engine.callMethod(java.lang.String operation, java.lang.String method, ProgressUpdater progress)	Calls the specified operation/method pair.

Uses of ProgressUpdater in mgui.interfaces.variables

Methods in mgui.interfaces.variables with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	VariableInt.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	VariableInt.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.interfaces.xml

Methods in mgui.interfaces.xml with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	XMLObject.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)	Writes the XML representation of this object to file, as XMLType.Normal.
void	XMLObject.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)	Writes the XML representation of this object to file.

Uses of ProgressUpdater in mgui.io

Methods in mgui.io with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	FileLoader.load(ProgressUpdater progress_bar)	Loads data from the set of files or URLs specified by options.
abstract boolean	FileLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)	Loads data from the set of files or URLs specified by options.
java.lang.Object	FileLoader.loadObject(ProgressUpdater progress_bar)	Loads data into an instance of the object corresponding to this loader.
java.lang.Object	FileLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)	Loads data into an instance of the object corresponding to this loader.
boolean	FileWriter.write(ProgressUpdater progress_bar)
abstract boolean	FileWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)	Writes this object according to the given options.
void	InterfaceIOOptions.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	InterfaceIOOptions.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.domestic

Methods in mgui.io.domestic with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	WorkspaceWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.domestic.datasources

Methods in mgui.io.domestic.datasources with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	DataSourceDriverLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	DataSourceLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	ImportDataTableTextLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
abstract boolean	ImportDataTableLoader.loadDataTable(java.lang.String name, java.util.ArrayList<DataField> fields, java.util.ArrayList<java.lang.Boolean> include, ProgressUpdater progress_bar)	Loads data from the current data file into a new data table, which will be created in data_source.
boolean	ImportDataTableTextLoader.loadDataTable(java.lang.String name, java.util.ArrayList<DataField> fields, java.util.ArrayList<java.lang.Boolean> include, ProgressUpdater progress_bar)
java.lang.Object	DataSourceDriverLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	DataSourceLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	ImportDataTableTextLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	DataSourceLoader.loadObjectXml(ProgressUpdater progress_bar)	Loads this data source from an XML format file
boolean	DataSourceDriverWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	DataSourceWriter.write(InterfaceIOOptions options, ProgressUpdater progressBar)
boolean	ExportDataTableWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	ExportDataTableExcelWriter.writeDataItem(DataSourceItem item, ProgressUpdater progress_bar)
boolean	ExportDataTableTextWriter.writeDataItem(DataSourceItem item, ProgressUpdater progress_bar)
abstract boolean	ExportDataTableWriter.writeDataItem(DataSourceItem item, ProgressUpdater progress_bar)	Writes a DataSourceItem to an external format, using the current settings of this writer.

Uses of ProgressUpdater in mgui.io.domestic.graphs

Methods in mgui.io.domestic.graphs with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	GraphFileLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
java.lang.Object	GraphFileLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
boolean	GraphFileWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	GraphFileWriter.writeGraph(InterfaceAbstractGraph graph, ProgressUpdater progress_bar)	Writes this graph to file using its domestic XML representation.

Uses of ProgressUpdater in mgui.io.domestic.maps

Methods in mgui.io.domestic.maps with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	ColourMapLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	ContinuousColourMapLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	DiscreteColourMapLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	NameMapLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
ContinuousColourMap	ContinuousColourMapLoader.loadMap(ProgressUpdater progress_bar)
java.lang.Object	ColourMapLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	NameMapLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
boolean	ContinuousColourMapWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	DiscreteColourMapWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	NameMapWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.domestic.network

Methods in mgui.io.domestic.network with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	CorticalNetworkMatrixLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
java.lang.Object	CorticalNetworkMatrixLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)

Uses of ProgressUpdater in mgui.io.domestic.pipelines

Methods in mgui.io.domestic.pipelines with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	PipelineLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	PipelineProcessLibraryLoader.load(InterfaceIOOptions options, ProgressUpdater progressBar)
PipelineProcessLibrary	PipelineProcessLibraryLoader.loadLibrary(ProgressUpdater progress, InterfaceIOOptions options)
java.lang.Object	PipelineLoader.loadObject(ProgressUpdater progressBar, InterfaceIOOptions options)
java.lang.Object	PipelineProcessLibraryLoader.loadObject(ProgressUpdater progressBar, InterfaceIOOptions options)
boolean	PipelineProcessLibraryWriter.write(InterfaceIOOptions options, ProgressUpdater progressBar)
boolean	PipelineWriter.write(InterfaceIOOptions options, ProgressUpdater progressBar)
boolean	PipelineProcessLibraryWriter.writeLibrary(PipelineProcessLibrary library, ProgressUpdater progressBar)

Uses of ProgressUpdater in mgui.io.domestic.printing

Methods in mgui.io.domestic.printing with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	StlWriter.writeAscii(Mesh3DInt mesh, ProgressUpdater progress_bar)	Writes mesh as an ASCII-format STL file.
boolean	StlWriter.writeBinary(Mesh3DInt mesh, ProgressUpdater progress_bar)	Writes mesh as an binary-format STL file.
boolean	StlWriter.writeSurface(Mesh3DInt mesh, InterfaceIOOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.domestic.shapes

Methods in mgui.io.domestic.shapes with parameters of type ProgressUpdater

Modifier and Type	Method	Description
Volume3DInt	VolumeFileLoader.getVolume3D(int v, ProgressUpdater progress_bar)	Creates and returns a grid based on the metadata.
Volume3DInt	VolumeFileLoader.getVolume3D(VolumeInputOptions options, int v, ProgressUpdater progress_bar)	Creates and returns a grid based on the metadata.
protected Volume3DInt	VolumeFileLoader.getVolume3DCustom(VolumeInputOptions options, int v, ProgressUpdater progress_bar)	Creates and returns a grid based on the parameters in options.
boolean	InterfaceShapeLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	Point2DShapeLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	PointSet2DLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	PointSet3DDataLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	PointSet3DLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	PolygonSet3DLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	ShapeDataLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	ShapeModel3DLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	SurfaceDataFileLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	SurfaceFileLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	VectorSet3DLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	VolumeFileLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
java.util.HashMap<java.lang.String,java.util.ArrayList<MguiNumber>>	ShapeDataLoader.loadData(ProgressUpdater progress_bar)
java.util.HashMap<java.lang.String,java.util.ArrayList<MguiNumber>>	ShapeDataLoader.loadData(ShapeDataInputOptions options, ProgressUpdater progress_bar)
java.util.HashMap<java.lang.String,java.util.ArrayList<MguiNumber>>	ShapeDataLoader.loadDataBlocking(ShapeDataInputOptions options, ProgressUpdater progress_bar)
java.util.HashMap<java.lang.String,java.util.ArrayList<MguiNumber>>	VectorDataLoader.loadDataBlocking(ShapeDataInputOptions options, ProgressUpdater progress_bar)
ShapeModel3D	ShapeModel3DLoader.loadModel(ShapeModel3DInputOptions options, ProgressUpdater progress_bar)
protected ShapeModel3D	ShapeModel3DLoader.loadModelBlocking(ShapeModel3DInputOptions options, ProgressUpdater progress_bar)
java.lang.Object	InterfaceShapeLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	Point2DShapeLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	PointSet3DDataLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	PointSet3DLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	PolygonSet3DLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	ShapeDataLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	ShapeModel3DLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	SurfaceDataFileLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	SurfaceFileLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	VectorSet3DLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	VolumeFileLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
PointSet2DInt	PointSet2DLoader.loadPointSet(ProgressUpdater progress_bar)
PointSet3DInt	PointSet3DLoader.loadPointSet(ProgressUpdater progress_bar)
protected PointSet2DInt	PointSet2DLoader.loadPointSetBlocking(ProgressUpdater progress_bar)
protected PointSet3DInt	PointSet3DLoader.loadPointSetBlocking(ProgressUpdater progress_bar)
ShapeSet3DInt	PolygonSet3DLoader.loadPolygonSet(ProgressUpdater progress_bar)
protected ShapeSet3DInt	PolygonSet3DLoader.loadPolygonSetBlocking(ProgressUpdater progress_bar)
abstract InterfaceShape	InterfaceShapeLoader.loadShape(ShapeInputOptions options, ProgressUpdater progress_bar)	Loads a shape with the given options.
InterfaceShape	Mesh3DLoader.loadShape(ShapeInputOptions options, ProgressUpdater progress_bar)
InterfaceShape	PointSet2DLoader.loadShape(ShapeInputOptions options, ProgressUpdater progress_bar)
InterfaceShape	ShapeXmlLoader.loadShape(ShapeInputOptions options, ProgressUpdater progress_bar)
InterfaceShape	SurfaceFileLoader.loadShape(ShapeInputOptions options, ProgressUpdater progress_bar)
InterfaceShape	VolumeFileLoader.loadShape(ShapeInputOptions options, ProgressUpdater progress_bar)
protected InterfaceShape	ShapeXmlLoader.loadShapeBlocking(ShapeInputOptions options, ProgressUpdater progress_bar)
Mesh3DInt	Mesh3DLoader.loadSurface(ProgressUpdater progress_bar, InterfaceIOOptions options)
Mesh3DInt	SurfaceFileLoader.loadSurface(ProgressUpdater progress_bar)	Loads a single surface from the appropriate source.
abstract Mesh3DInt	SurfaceFileLoader.loadSurface(ProgressUpdater progress_bar, InterfaceIOOptions options)	Loads a single surface from the appropriate source.
java.util.ArrayList<java.util.ArrayList<MguiNumber>>	PointSet3DDataLoader.loadValues(ProgressUpdater progress_bar)
abstract java.util.ArrayList<MguiNumber>	SurfaceDataFileLoader.loadValues(ProgressUpdater progress_bar)
protected java.util.ArrayList<java.util.ArrayList<MguiNumber>>	PointSet3DDataLoader.loadValuesBlocking(ProgressUpdater progress_bar)
VectorSet3DInt	VectorSet3DLoader.loadVectorSet(ProgressUpdater progress_bar)
protected VectorSet3DInt	VectorSet3DLoader.loadVectorSetBlocking(ProgressUpdater progress_bar)
Volume3DInt	VolumeFileLoader.loadVolume(ProgressUpdater progress_bar)	Load the volume at the current file.
Volume3DInt	VolumeFileLoader.loadVolume(VolumeInputOptions options, ProgressUpdater progress_bar)	Load the volume at the current file, with the given options.
boolean	VolumeFileLoader.setVolume3D(Volume3DInt volume, int v, VolumeInputOptions options, ProgressUpdater progress)
boolean	VolumeFileLoader.setVolume3D(Volume3DInt volume, java.lang.String column, int v, VolumeInputOptions options, ProgressUpdater progress)
protected abstract boolean	VolumeFileLoader.setVolume3DBlocking(Volume3DInt volume, java.lang.String column, int v, VolumeInputOptions options, ProgressUpdater progress)
protected boolean	VolumeFileLoader.setVolume3DWorker(Volume3DInt volume, java.lang.String column, int v, VolumeInputOptions options, ProgressUpdater progress)
boolean	Graph3DWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	ShapeModel3DWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	ShapeXmlWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	SurfaceDataFileWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	SurfaceFileWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	VolumeFileWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	Graph3DWriter.writeGraph(Graph3DInt graph, ProgressUpdater progress_bar)	Writes this Graph3DInt to file using its domestic XML representation.
boolean	ShapeModel3DWriter.writeModel(ShapeModel3DOutputOptions options, ProgressUpdater progress_bar)
abstract boolean	InterfaceShapeWriter.writeShape(InterfaceShape shape, ProgressUpdater progress_bar)	Writes this shape to file using its domestic XML representation.
boolean	ShapeXmlWriter.writeShape(InterfaceShape shape, ProgressUpdater progress_bar)
boolean	Mesh3DWriter.writeSurface(Mesh3DInt mesh, InterfaceIOOptions options, ProgressUpdater progress_bar)
abstract boolean	SurfaceFileWriter.writeSurface(Mesh3DInt mesh, InterfaceIOOptions options, ProgressUpdater progress_bar)	Write mesh with this FileWriter.
boolean	Mesh3DWriter.writeSurfaceBlocking(Mesh3DInt mesh, ProgressUpdater progress_bar)
boolean	SurfaceFileWriter.writeSurfaces(java.util.ArrayList<Mesh3DInt> meshes, InterfaceIOOptions options, ProgressUpdater progress_bar)	Write meshes with this FileWriter.
abstract boolean	SurfaceDataFileWriter.writeValues(java.util.ArrayList<MguiNumber> values, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.domestic.shapes.xml

Methods in mgui.io.domestic.shapes.xml with parameters of type ProgressUpdater

Modifier and Type	Method	Description
static InterfaceShape	ShapeXMLFunctions.loadShape(java.lang.String loader, java.lang.String url, ShapeInputOptions options, ProgressUpdater progress_bar)	Attempts to load a shape with the given loader and url.

Uses of ProgressUpdater in mgui.io.domestic.variables

Methods in mgui.io.domestic.variables with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	MatrixFileLoader.load(InterfaceIOOptions _options, ProgressUpdater progress_bar)
boolean	MatrixTransformLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	StringVectorLoader.load(InterfaceIOOptions _options, ProgressUpdater progress_bar)
Jama.Matrix	DefaultMatrixFileLoader.loadMatrix(ProgressUpdater progress_bar)
abstract Jama.Matrix	MatrixFileLoader.loadMatrix(ProgressUpdater progress_bar)
Jama.Matrix	DefaultMatrixFileLoader.loadMatrixAsciiFullBlocking(ProgressUpdater progress_bar)
Jama.Matrix	DefaultMatrixFileLoader.loadMatrixAsciiSparseBlocking(ProgressUpdater progress_bar)
Jama.Matrix	DefaultMatrixFileLoader.loadMatrixBinaryFullBlocking(ProgressUpdater progress_bar)
Jama.Matrix	DefaultMatrixFileLoader.loadMatrixBinarySparseBlocking(ProgressUpdater progress_bar)
java.lang.Object	DefaultMatrixFileLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	MatrixTransformLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	StringVectorLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
protected java.util.ArrayList<java.lang.String>	StringVectorLoader.loadStringArray(ProgressUpdater progress_bar)	Loads an array of Strings from a delimited text file.
boolean	DefaultMatrixFileWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	DefaultMatrixFileWriter.writeMatrix(Jama.Matrix m, ProgressUpdater progress_bar)
abstract boolean	MatrixFileWriter.writeMatrix(Jama.Matrix m, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.domestic.videos

Methods in mgui.io.domestic.videos with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	VideoLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
java.lang.Object	VideoXMLLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
abstract Video	VideoLoader.loadVideo(VideoInputOptions options, ProgressUpdater progress_bar)
Video	VideoXMLLoader.loadVideo(VideoInputOptions options, ProgressUpdater progress_bar)
boolean	VideoWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
protected boolean	ImageStackVideoWriter.writeFromOffscreenBufferBlocking(ImageStackVideoOptions options, ProgressUpdater progress_bar)
protected boolean	ImageStackVideoWriter.writeFromScreenshotsBlocking(ImageStackVideoOptions options, ProgressUpdater progress_bar)
boolean	ImageStackVideoWriter.writeVideo(VideoOutputOptions options, ProgressUpdater progress_bar)
abstract boolean	VideoWriter.writeVideo(VideoOutputOptions options, ProgressUpdater progress_bar)
boolean	ImageStackVideoWriter.writeVideo3D(ImageStackVideoOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.domestic.views

Methods in mgui.io.domestic.views with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	View3DLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
java.lang.Object	View3DLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
boolean	View3DWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.foreign.amira

Methods in mgui.io.foreign.amira with parameters of type ProgressUpdater

Modifier and Type	Method	Description
ShapeSet3DInt	AmiraTractLoader.loadPolygonSetBlocking(ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.foreign.camino

Methods in mgui.io.foreign.camino with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	CaminoPipelineLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	CaminoProjectLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
java.lang.Object	CaminoPipelineLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.lang.Object	CaminoProjectLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
boolean	CaminoPipelineWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	CaminoProjectWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.foreign.caret

Methods in mgui.io.foreign.caret with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	CaretAreaColourLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	CaretMetricLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	CaretPaintLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	CaretSurfaceLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
java.util.ArrayList<java.util.ArrayList<MguiNumber>>	CaretMetricLoader.loadAllValues(ProgressUpdater progress_bar)
protected Mesh3DInt	CaretSurfaceLoader.loadBinarySurface(ProgressUpdater progress_bar)
java.lang.Object	CaretMetricLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
Mesh3DInt	CaretSurfaceLoader.loadSurface(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.util.ArrayList<MguiNumber>	CaretMetricLoader.loadValues(ProgressUpdater progress_bar)
java.util.ArrayList<MguiNumber>	CaretPaintLoader.loadValues(ProgressUpdater progress_bar)
boolean	CaretAreaColourWriter.write(InterfaceIOOptions options, ProgressUpdater progressBar)
boolean	CaretPaintWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	CaretSurfaceWriter.write(InterfaceIOOptions options, ProgressUpdater progress_bar)
protected boolean	CaretSurfaceWriter.writeBinarySurface(Mesh3DInt mesh3d, ProgressUpdater progress_bar)
boolean	CaretSurfaceWriter.writeSurface(Mesh3DInt mesh, InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	CaretPaintWriter.writeValues(java.util.ArrayList<MguiNumber> values, ProgressUpdater progressBar)	Overridden from SurfaceDataFileWriter.
boolean	CaretPaintWriter.writeValues(SurfaceDataOutputOptions options, java.lang.String column, ProgressUpdater progressBar)

Uses of ProgressUpdater in mgui.io.foreign.duff

Methods in mgui.io.foreign.duff with parameters of type ProgressUpdater

Modifier and Type	Method	Description
Mesh3DInt	DuffSurfaceLoader.loadSurface(ProgressUpdater progress_bar, InterfaceIOOptions options)

Uses of ProgressUpdater in mgui.io.foreign.freesurfer

Methods in mgui.io.foreign.freesurfer with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	FreesurferVertexDataLoader.load(InterfaceIOOptions _options, ProgressUpdater progress_bar)
java.lang.Object	FreesurferVertexDataLoader.loadObject(ProgressUpdater progress_bar)
Mesh3DInt	FreesurferSurfaceLoader.loadSurface(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.util.ArrayList<MguiNumber>	FreesurferVertexDataLoader.loadValues(ProgressUpdater progress_bar)
protected java.util.ArrayList<MguiNumber>	FreesurferVertexDataLoader.loadValuesAnnotation(ProgressUpdater progress_bar)
protected java.util.ArrayList<MguiNumber>	FreesurferVertexDataLoader.loadValuesAscii(ProgressUpdater progress_bar)
protected java.util.ArrayList<MguiNumber>	FreesurferVertexDataLoader.loadValuesDense1(ProgressUpdater progress_bar)
protected java.util.ArrayList<MguiNumber>	FreesurferVertexDataLoader.loadValuesDense2(ProgressUpdater progress_bar)
protected java.util.ArrayList<MguiNumber>	FreesurferVertexDataLoader.loadValuesLabel(ProgressUpdater progress_bar)
protected java.util.ArrayList<MguiNumber>	FreesurferVertexDataLoader.loadValuesSparse(ProgressUpdater progress_bar)
boolean	FreesurferSurfaceWriter.writeSurface(Mesh3DInt mesh, InterfaceIOOptions options, ProgressUpdater progress_bar)
protected boolean	FreesurferSurfaceWriter.writeSurfaceAscii(Mesh3DInt mesh, InterfaceIOOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.foreign.fsl

Methods in mgui.io.foreign.fsl with parameters of type ProgressUpdater

Modifier and Type	Method	Description
Mesh3DInt	FSLSurfaceLoader.loadSurface(ProgressUpdater progress_bar, InterfaceIOOptions options)
java.util.ArrayList<MguiNumber>	FSLVolumeMetadata.readVolume(int t, DataType data_type, ProgressUpdater progress)
java.util.ArrayList<MguiNumber>	FSLVolumeMetadata.readVolume(java.io.File data_file, int t, DataType data_type, ProgressUpdater progress)	Reads the 3D volume at the specified volume t, from data_file.
protected boolean	FSLVolumeLoader.setVolume3DBlocking(Volume3DInt volume, java.lang.String column, int v, VolumeInputOptions options, ProgressUpdater progress)

Uses of ProgressUpdater in mgui.io.foreign.interfile

Methods in mgui.io.foreign.interfile with parameters of type ProgressUpdater

Modifier and Type	Method	Description
protected boolean	InterfileLoader.setVolume3DBlocking(Volume3DInt volume, java.lang.String column, int v, VolumeInputOptions options, ProgressUpdater progress)

Uses of ProgressUpdater in mgui.io.foreign.minc

Methods in mgui.io.foreign.minc with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	MincSurfaceDataLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	MincTransformLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
java.lang.Object	MincTransformLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)
Mesh3DInt	MincSurfaceLoader.loadSurface(ProgressUpdater progress_bar, InterfaceIOOptions options)
protected Mesh3DInt	MincSurfaceLoader.loadSurfaceBlocking(ProgressUpdater progress_bar)
java.util.ArrayList<MguiNumber>	MincSurfaceDataLoader.loadValues(ProgressUpdater progress_bar)
boolean	MincSurfaceWriter.writeSurface(Mesh3DInt mesh, InterfaceIOOptions options, ProgressUpdater progress_bar)
boolean	MincSurfaceDataWriter.writeValues(java.util.ArrayList<MguiNumber> values, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.foreign.pajek

Methods in mgui.io.foreign.pajek with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	PajekGraphLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.foreign.vol

Methods in mgui.io.foreign.vol with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	VolFileLoader.setVolume3D(Volume3DInt volume, java.lang.String column, int v, VolumeInputOptions options, ProgressUpdater progress)	Fills a grid with this file's data.
protected boolean	VolFileLoader.setVolume3DBlocking(Volume3DInt volume, java.lang.String column, int v, VolumeInputOptions options, ProgressUpdater progress)

Uses of ProgressUpdater in mgui.io.foreign.wavefront

Methods in mgui.io.foreign.wavefront with parameters of type ProgressUpdater

Modifier and Type	Method	Description
Mesh3DInt	WavefrontSurfaceLoader.loadSurface(ProgressUpdater progress_bar, InterfaceIOOptions options)
boolean	WavefrontSurfaceWriter.writeSurface(Mesh3DInt mesh, InterfaceIOOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.foreign.wunil

Methods in mgui.io.foreign.wunil with parameters of type ProgressUpdater

Modifier and Type	Method	Description
java.util.ArrayList<MguiNumber>	WunilDataset.readVolume(int t, DataType data_type, ProgressUpdater progress)
boolean	WunilVolumeLoader.setVolume3DBlocking(Volume3DInt volume, java.lang.String column, int v, VolumeInputOptions options, ProgressUpdater progress)

Uses of ProgressUpdater in mgui.io.standard.gifti

Methods in mgui.io.standard.gifti with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	GiftiSurfaceLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
Mesh3DInt	GiftiSurfaceLoader.loadSurface(ProgressUpdater progress_bar, InterfaceIOOptions options)
boolean	GiftiSurfaceWriter.writeSurface(Mesh3DInt mesh_int, InterfaceIOOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.standard.imaging

Methods in mgui.io.standard.imaging with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	ImageFileLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
java.lang.Object	ImageFileLoader.loadObject(ProgressUpdater progress_bar, InterfaceIOOptions options)

Uses of ProgressUpdater in mgui.io.standard.json

Methods in mgui.io.standard.json with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	JsonFileLoader.load(InterfaceIOOptions options, ProgressUpdater progress_bar)
com.google.gson.JsonObject	JsonFileLoader.loadObject(InterfaceIOOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.io.standard.nifti

Methods in mgui.io.standard.nifti with parameters of type ProgressUpdater

Modifier and Type	Method	Description
java.util.ArrayList<MguiNumber>	NiftiMetadata.readVolume(int t, DataType data_type, ProgressUpdater progress)
protected boolean	NiftiVolumeLoader.setVolume3DBlocking(Volume3DInt volume3d, java.lang.String column, int v, VolumeInputOptions options, ProgressUpdater progress)

Uses of ProgressUpdater in mgui.io.standard.xml

Methods in mgui.io.standard.xml with parameters of type ProgressUpdater

Modifier and Type	Method	Description
boolean	XMLWriter.writeObject(XMLOutputOptions options, ProgressUpdater progress_bar)	Writes an XML object given options.
protected void	XMLWriter.writeXMLObject(XMLOutputOptions options, ProgressUpdater progress)	Write the object specified in options.

Uses of ProgressUpdater in mgui.io.util

Methods in mgui.io.util with parameters of type ProgressUpdater

Modifier and Type	Method	Description
static boolean	IoFunctions.copyDir(java.io.File dir, java.io.File dest, boolean recurse, ProgressUpdater progress)	Copies the directory dir and all its contents to the directory dest.
static boolean	IoFunctions.copyDirContents(java.io.File dir, java.io.File dest, boolean recurse, ProgressUpdater progress)	Copies the contents of directory dir (but not the directory itself) to the directory dest.
static boolean	IoFunctions.moveDir(java.io.File dir, java.io.File dest, boolean recurse, ProgressUpdater progress)	Move the directory dir and all its contents to the directory dest.
static boolean	IoFunctions.moveDirContents(java.io.File dir, java.io.File dest, boolean recurse, ProgressUpdater progress)	Move the contents of directory dir (but not the directory itself) to the directory dest.

Uses of ProgressUpdater in mgui.neuro.graphs

Methods in mgui.neuro.graphs with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	CorticalNetworkGraphNode.writeXML(int tab, java.io.Writer writer, XMLOutputOptions optionsXMLOutputOptions, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.neuro.imaging.camino

Methods in mgui.neuro.imaging.camino with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	CaminoProject.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	CaminoProject.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.numbers

Methods in mgui.numbers with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	MguiBoolean.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	MguiBoolean.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	MguiDouble.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	MguiDouble.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	MguiFloat.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	MguiFloat.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	MguiInteger.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	MguiInteger.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	MguiLong.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	MguiLong.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	MguiShort.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	MguiShort.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.pipelines

Methods in mgui.pipelines with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	InterfacePipeline.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	NativeProcess.writeXML(int tab, java.io.Writer writer, ProgressUpdater progressBar)
void	PipelineProcess.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	PipelineProcess.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)
void	PipelineTask.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	PipelineTask.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)

Uses of ProgressUpdater in mgui.util

Methods in mgui.util with parameters of type ProgressUpdater

Modifier and Type	Method	Description
void	Colour.writeXML(int tab, java.io.Writer writer, ProgressUpdater progress_bar)
void	Colour.writeXML(int tab, java.io.Writer writer, XMLOutputOptions options, ProgressUpdater progress_bar)