Package mgui.neuro.components.cortical

Class CorticalVolume

java.lang.Object

mgui.interfaces.AbstractInterfaceObject

mgui.models.networks.components.AbstractNetworkComponent

mgui.neuro.components.AbstractNeuroComponent

mgui.neuro.components.cortical.AbstractCorticalRegion

mgui.neuro.components.cortical.simple.SimpleCorticalRegion

mgui.neuro.components.cortical.CorticalVolume

All Implemented Interfaces:

java.lang.Cloneable, java.lang.Comparable<DynamicModelComponent>, AttributeListener, AttributeObject, InterfaceObject, NamedObject, TreeObject, CleanableObject, DynamicModelComponent, TimeStepListener, Updateable

public class CorticalVolume
extends SimpleCorticalRegion

A Volume3D-based representation of a cortical region. Contains a pointer to a Volume3DInt object and an array of integers holding the indices of the voxels comprising this cortical area.

Version:

1.0

Author:

Andrew Reid

Field Summary

Fields

Modifier and Type	Field	Description
Volume3DInt	volume
int[]	voxels

Fields inherited from class mgui.neuro.components.cortical.simple.SimpleCorticalRegion

firingRate, input, output, state

Fields inherited from class mgui.neuro.components.cortical.AbstractCorticalRegion

location

Fields inherited from class mgui.neuro.components.AbstractNeuroComponent

attributes, clock, connections, events, hasSubComponents, id, listeners, solver, updated

Fields inherited from class mgui.interfaces.AbstractInterfaceObject

isDestroyed, tree_nodes

Constructor Summary

Constructors

Constructor	Description
CorticalVolume(Volume3DInt vol)

Method Summary

Modifier and Type	Method	Description
java.lang.Object	clone()
void	connectTo(AbstractCorticalRegion region)
void	connectTo(AbstractCorticalRegion region, double weight)
Volume3DInt	getVolume()
void	setVolume(Volume3DInt vol)
void	setVoxels(int[] v)

Methods inherited from class mgui.neuro.components.cortical.simple.SimpleCorticalRegion

executeEvent, getBasicSimpleCorticalRegion, getFiringRate, getInput, getInputFunction, getOutput, getSubComponents, getTransferFunction, init, reset, setFiringRate, setInputFunction, setName, setOutput, setSolver, setTransferFunction, setTreeNode, toString, updateComponent

Methods inherited from class mgui.neuro.components.cortical.AbstractCorticalRegion

getComparator, getLocation, getName, getStrComparator, setLocation

Methods inherited from class mgui.neuro.components.AbstractNeuroComponent

addConnection, addEvent, addListener, addToEngine, attributeUpdated, compareTo, executeEvents, fireListeners, fireListeners, getAttribute, getAttributes, getConnections, getDelay, getID, getODESolver, getRate, getSolver, hasSubComponents, removeConnection, removeListener, resetClock, setAttribute, setAttributes, setDelay, setID, setID, setODESolver, setSolver, timeElapsed, updateFromClock

Methods inherited from class mgui.models.networks.components.AbstractNetworkComponent

getAttributeValue

Methods inherited from class mgui.interfaces.AbstractInterfaceObject

clean, destroy, getTreeLabel, isDestroyed, issueTreeNode, updateTreeNodes

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface mgui.interfaces.util.CleanableObject

clean

Methods inherited from interface mgui.interfaces.InterfaceObject

destroy, isDestroyed

Methods inherited from interface mgui.interfaces.trees.TreeObject

getTreeLabel, issueTreeNode

Field Details

volume

public Volume3DInt volume

voxels

public int[] voxels

Constructor Details

CorticalVolume

public CorticalVolume(Volume3DInt vol)

Method Details

connectTo

public void connectTo(AbstractCorticalRegion region,
double weight)

Overrides:

connectTo in class SimpleCorticalRegion

setVolume

public void setVolume(Volume3DInt vol)

getVolume

public Volume3DInt getVolume()

setVoxels

public void setVoxels(int[] v)

connectTo

public void connectTo(AbstractCorticalRegion region)

clone

public java.lang.Object clone()

Specified by:

clone in interface DynamicModelComponent

Overrides:

clone in class SimpleCorticalRegion