Package mgui.neuro.components.cortical.simple

Class SimpleCorticalRegion

java.lang.Object

mgui.interfaces.AbstractInterfaceObject

mgui.models.networks.components.AbstractNetworkComponent

mgui.neuro.components.AbstractNeuroComponent

mgui.neuro.components.cortical.AbstractCorticalRegion

mgui.neuro.components.cortical.simple.SimpleCorticalRegion

All Implemented Interfaces:

java.lang.Cloneable, java.lang.Comparable<DynamicModelComponent>, AttributeListener, AttributeObject, InterfaceObject, NamedObject, TreeObject, CleanableObject, DynamicModelComponent, TimeStepListener, Updateable

Direct Known Subclasses:

CorticalVolume

public class SimpleCorticalRegion
extends AbstractCorticalRegion

Field Summary

Fields

Modifier and Type	Field	Description
protected double	firingRate
protected double	input
SimpleCorticalOutput	output
protected double[]	state

Fields inherited from class mgui.neuro.components.cortical.AbstractCorticalRegion

location

Fields inherited from class mgui.neuro.components.AbstractNeuroComponent

attributes, clock, connections, events, hasSubComponents, id, listeners, solver, updated

Fields inherited from class mgui.interfaces.AbstractInterfaceObject

isDestroyed, tree_nodes

Constructor Summary

Constructors

Constructor	Description
SimpleCorticalRegion()
SimpleCorticalRegion(java.lang.String name)
SimpleCorticalRegion(java.lang.String name, CorticalFunction transferFunction)
SimpleCorticalRegion(java.lang.String name, CorticalFunction transferFunction, Function inputFunction)
SimpleCorticalRegion(CorticalFunction transferFunction)
SimpleCorticalRegion(CorticalFunction transferFunction, Function inputFunction)

Method Summary

Modifier and Type	Method	Description
java.lang.Object	clone()
void	connectTo(AbstractCorticalRegion target, double weight)
protected boolean	executeEvent(DynamicModelEvent e)
SimpleCorticalRegion	getBasicSimpleCorticalRegion()
double	getFiringRate()
double	getInput()
Function	getInputFunction()
AbstractCorticalOutput	getOutput()
java.util.ArrayList<DynamicModelComponent>	getSubComponents()	Returns a list of the complete subcomponent tree.
CorticalFunction	getTransferFunction()
protected void	init()
void	reset()
protected void	setFiringRate()
void	setInputFunction(Function f)
void	setName(java.lang.String name)	Sets the name for this object.
void	setOutput(SimpleCorticalOutput o)
void	setSolver()
void	setTransferFunction(CorticalFunction f)
void	setTreeNode(InterfaceTreeNode treeNode)	Sets the children for this node's InterfaceTreeNode.
java.lang.String	toString()
protected boolean	updateComponent()

Methods inherited from class mgui.neuro.components.cortical.AbstractCorticalRegion

getComparator, getLocation, getName, getStrComparator, setLocation

Methods inherited from class mgui.neuro.components.AbstractNeuroComponent

addConnection, addEvent, addListener, addToEngine, attributeUpdated, compareTo, executeEvents, fireListeners, fireListeners, getAttribute, getAttributes, getConnections, getDelay, getID, getODESolver, getRate, getSolver, hasSubComponents, removeConnection, removeListener, resetClock, setAttribute, setAttributes, setDelay, setID, setID, setODESolver, setSolver, timeElapsed, updateFromClock

Methods inherited from class mgui.models.networks.components.AbstractNetworkComponent

getAttributeValue

Methods inherited from class mgui.interfaces.AbstractInterfaceObject

clean, destroy, getTreeLabel, isDestroyed, issueTreeNode, updateTreeNodes

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface mgui.interfaces.util.CleanableObject

clean

Methods inherited from interface mgui.interfaces.InterfaceObject

destroy, isDestroyed

Methods inherited from interface mgui.interfaces.trees.TreeObject

getTreeLabel, issueTreeNode

Field Details

input

protected double input

firingRate

protected double firingRate

state

protected double[] state

output

public SimpleCorticalOutput output

Constructor Details

SimpleCorticalRegion

public SimpleCorticalRegion()

SimpleCorticalRegion

public SimpleCorticalRegion(CorticalFunction transferFunction)

SimpleCorticalRegion

public SimpleCorticalRegion(CorticalFunction transferFunction,
Function inputFunction)

SimpleCorticalRegion

public SimpleCorticalRegion(java.lang.String name)

SimpleCorticalRegion

public SimpleCorticalRegion(java.lang.String name,
CorticalFunction transferFunction)

SimpleCorticalRegion

public SimpleCorticalRegion(java.lang.String name,
CorticalFunction transferFunction,
Function inputFunction)

Method Details

init

protected void init()

Overrides:

init in class AbstractCorticalRegion

reset

public void reset()

Specified by:

reset in interface DynamicModelComponent

Overrides:

reset in class AbstractNeuroComponent

setOutput

public void setOutput(SimpleCorticalOutput o)

setName

public void setName(java.lang.String name)

Description copied from interface: NamedObject

Sets the name for this object.

Specified by:

setName in interface NamedObject

Overrides:

setName in class AbstractCorticalRegion

getOutput

public AbstractCorticalOutput getOutput()

Specified by:

getOutput in class AbstractCorticalRegion

getBasicSimpleCorticalRegion

public SimpleCorticalRegion getBasicSimpleCorticalRegion()

setInputFunction

public void setInputFunction(Function f)

getInputFunction

public Function getInputFunction()

setTransferFunction

public void setTransferFunction(CorticalFunction f)

getTransferFunction

public CorticalFunction getTransferFunction()

getInput

public double getInput()

getFiringRate

public double getFiringRate()

executeEvent

protected boolean executeEvent(DynamicModelEvent e)
                        throws NeuroException

Overrides:

executeEvent in class AbstractNeuroComponent

Throws:

NeuroException

updateComponent

protected boolean updateComponent()

Overrides:

updateComponent in class AbstractNeuroComponent

setSolver

public void setSolver()

Overrides:

setSolver in class AbstractNeuroComponent

setFiringRate

protected void setFiringRate()

connectTo

public void connectTo(AbstractCorticalRegion target,
double weight)

Specified by:

connectTo in class AbstractCorticalRegion

getSubComponents

public java.util.ArrayList<DynamicModelComponent> getSubComponents()

Description copied from class: AbstractNeuroComponent

Returns a list of the complete subcomponent tree. Subclasses containing subcomponents should override this and provide an enumeration of all subcomponents, also calling this method for each subcomponent to ensure a complete tree is returned.

Specified by:

getSubComponents in interface DynamicModelComponent

Overrides:

getSubComponents in class AbstractNeuroComponent

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

clone

public java.lang.Object clone()

Specified by:

clone in interface DynamicModelComponent

Specified by:

clone in class AbstractNeuroComponent

setTreeNode

public void setTreeNode(InterfaceTreeNode treeNode)

Description copied from interface: TreeObject

Sets the children for this node's InterfaceTreeNode.

Specified by:

setTreeNode in interface TreeObject

Overrides:

setTreeNode in class AbstractInterfaceObject