Package mgui.io.foreign.freesurfer

Class FreesurferSurfaceLoader

java.lang.Object

mgui.io.FileLoader

mgui.io.domestic.shapes.InterfaceShapeLoader

mgui.io.domestic.shapes.SurfaceFileLoader

mgui.io.foreign.freesurfer.FreesurferSurfaceLoader

All Implemented Interfaces:

InterfaceIO, IconObject

public class FreesurferSurfaceLoader
extends SurfaceFileLoader

Reads a Freesurfer surface file, binary or ASCII format.

See: http://www.grahamwideman.com/gw/brain/fs/surfacefileformats.htm.

Since:

1.0

Version:

1.0

Author:

Andrew Reid

Field Summary

Fields inherited from class mgui.io.FileLoader

dataFile, dataURL, options

Constructor Summary

Constructors

Constructor	Description
FreesurferSurfaceLoader()
FreesurferSurfaceLoader(java.io.File file)

Method Summary

Modifier and Type	Method	Description
protected Mesh3DInt	loadAsciiSurface()
Mesh3DInt	loadSurface(ProgressUpdater progress_bar, InterfaceIOOptions options)	Loads a single surface from the appropriate source.

Methods inherited from class mgui.io.domestic.shapes.SurfaceFileLoader

getFailureMessage, getObjectIcon, getSuccessMessage, getSupportedObjects, getTitle, load, loadObject, loadShape, loadSurface, loadSurface, loadSurfaces

Methods inherited from class mgui.io.FileLoader

getComplementIOType, getFile, getIOType, getOptions, getProgressMessage, getWriterComplement, load, load, loadObject, loadObject, loadObject, setFile, setOptions, setURL, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

FreesurferSurfaceLoader

public FreesurferSurfaceLoader()

FreesurferSurfaceLoader

public FreesurferSurfaceLoader(java.io.File file)

Method Details

loadSurface

public Mesh3DInt loadSurface(ProgressUpdater progress_bar,
InterfaceIOOptions options)
                      throws java.io.IOException

Description copied from class: SurfaceFileLoader

Loads a single surface from the appropriate source. Returns a Mesh3DInt object if load was successful, or null otherwise. This method should also set the file loader and reference URL for the object.

Specified by:

loadSurface in class SurfaceFileLoader

Returns:

Mesh3DInt mesh representing the surface being loaded

Throws:

java.io.IOException

loadAsciiSurface

protected Mesh3DInt loadAsciiSurface()