Uses of Class
mgui.pipelines.InterfacePipeline

Packages that use InterfacePipeline

Package	Description
mgui.interfaces	This package contains all main/abstract interface objects (object which provides user interations) for ModelGUI.
mgui.interfaces.neuro.imaging.camino
mgui.interfaces.pipelines	This package provides interfaces for user interaction with pipelines.
mgui.interfaces.pipelines.trees
mgui.io.domestic.pipelines
mgui.io.foreign.camino
mgui.neuro.imaging.camino
mgui.pipelines	Provides a framework for defining and running processing pipelines in the ModelGUI environment.

Uses of InterfacePipeline in mgui.interfaces

Fields in mgui.interfaces with type parameters of type InterfacePipeline

Modifier and Type	Field	Description
protected java.util.HashMap<java.lang.String,InterfacePipeline>	InterfaceWorkspace.pipelines

Methods in mgui.interfaces that return InterfacePipeline

Modifier and Type	Method	Description
InterfacePipeline	InterfaceWorkspace.getPipeline(java.lang.String name)	Returns the pipeline with the given name.

Methods in mgui.interfaces that return types with arguments of type InterfacePipeline

Modifier and Type	Method	Description
java.util.ArrayList<InterfacePipeline>	InterfaceWorkspace.getPipelines()	Returns a list of the pipelines contained in this workspace.

Methods in mgui.interfaces with parameters of type InterfacePipeline

Modifier and Type	Method	Description
boolean	InterfaceWorkspace.addPipeline(InterfacePipeline pipeline)	Adds a pipeline to this workspace.
void	InterfaceWorkspace.removePipeline(InterfacePipeline pipeline)

Uses of InterfacePipeline in mgui.interfaces.neuro.imaging.camino

Methods in mgui.interfaces.neuro.imaging.camino that return InterfacePipeline

Modifier and Type	Method	Description
InterfacePipeline	CaminoPipelineTree.getSelectedPipeline()

Methods in mgui.interfaces.neuro.imaging.camino that return types with arguments of type InterfacePipeline

Modifier and Type	Method	Description
java.util.ArrayList<InterfacePipeline>	CaminoPipelineTree.getSelectedPipelines()

Methods in mgui.interfaces.neuro.imaging.camino with parameters of type InterfacePipeline

Modifier and Type	Method	Description
void	CaminoPipelineTree.expandPipelineNode(InterfacePipeline pipeline)

Uses of InterfacePipeline in mgui.interfaces.pipelines

Methods in mgui.interfaces.pipelines that return InterfacePipeline

Modifier and Type	Method	Description
protected InterfacePipeline	InterfacePipelinesPanel.getSelectedPipeline()

Methods in mgui.interfaces.pipelines that return types with arguments of type InterfacePipeline

Modifier and Type	Method	Description
protected java.util.ArrayList<InterfacePipeline>	InterfacePipelinesPanel.getSelectedPipelines()

Uses of InterfacePipeline in mgui.interfaces.pipelines.trees

Methods in mgui.interfaces.pipelines.trees that return InterfacePipeline

Modifier and Type	Method	Description
InterfacePipeline	PipelineTree.getSelectedPipeline()

Methods in mgui.interfaces.pipelines.trees that return types with arguments of type InterfacePipeline

Modifier and Type	Method	Description
java.util.ArrayList<InterfacePipeline>	PipelineTree.getSelectedPipelines()

Methods in mgui.interfaces.pipelines.trees with parameters of type InterfacePipeline

Modifier and Type	Method	Description
void	PipelineTree.expandPipelineNode(InterfacePipeline pipeline)
void	PipelineTree.setPipeline(InterfacePipeline pipeline)

Constructors in mgui.interfaces.pipelines.trees with parameters of type InterfacePipeline

Constructor	Description
PipelineTree(InterfacePipeline pipeline)

Uses of InterfacePipeline in mgui.io.domestic.pipelines

Fields in mgui.io.domestic.pipelines with type parameters of type InterfacePipeline

Modifier and Type	Field	Description
java.util.ArrayList<InterfacePipeline>	PipelineOutputOptions.pipelines

Methods in mgui.io.domestic.pipelines that return InterfacePipeline

Modifier and Type	Method	Description
InterfacePipeline	PipelineXMLHandler.getLastPipeline()	Returns the last pipeline loaded from XML.

Methods in mgui.io.domestic.pipelines that return types with arguments of type InterfacePipeline

Modifier and Type	Method	Description
java.util.ArrayList<InterfacePipeline>	PipelineXMLHandler.getPipelines()	Returns a list of the pipelines loaded from XML.

Methods in mgui.io.domestic.pipelines with parameters of type InterfacePipeline

Modifier and Type	Method	Description
boolean	PipelineWriter.writePipeline(InterfacePipeline pipeline)	Writes a pipeline to the current file.

Method parameters in mgui.io.domestic.pipelines with type arguments of type InterfacePipeline

Modifier and Type	Method	Description
boolean	PipelineWriter.writePipelines(java.util.ArrayList<InterfacePipeline> pipelines)	Writes multiple pipelines to the current file.

Constructor parameters in mgui.io.domestic.pipelines with type arguments of type InterfacePipeline

Constructor	Description
PipelineOutputOptions(java.util.ArrayList<InterfacePipeline> pipelines)

Uses of InterfacePipeline in mgui.io.foreign.camino

Methods in mgui.io.foreign.camino that return InterfacePipeline

Modifier and Type	Method	Description
InterfacePipeline	CaminoPipelineLoader.loadCaminoPipelineXML()

Methods in mgui.io.foreign.camino with parameters of type InterfacePipeline

Modifier and Type	Method	Description
boolean	CaminoPipelineWriter.writePipelineXML(InterfacePipeline pipeline)

Uses of InterfacePipeline in mgui.neuro.imaging.camino

Fields in mgui.neuro.imaging.camino with type parameters of type InterfacePipeline

Modifier and Type	Field	Description
java.util.ArrayList<InterfacePipeline>	CaminoProject.pipelines

Methods in mgui.neuro.imaging.camino with parameters of type InterfacePipeline

Modifier and Type	Method	Description
void	CaminoProject.addPipeline(InterfacePipeline pipeline)
void	CaminoProject.removePipeline(InterfacePipeline pipeline)

Uses of InterfacePipeline in mgui.pipelines

Fields in mgui.pipelines declared as InterfacePipeline

Modifier and Type	Field	Description
protected InterfacePipeline	PipelineFork.output_pipeline
protected InterfacePipeline	PipelineFork.pipeline
InterfacePipeline	PipelineLauncher.pipeline
protected InterfacePipeline	PipelineProcessInstance.pipeline
InterfacePipeline	PipelineState.pipeline
protected InterfacePipeline	InterfacePipeline.root_pipeline

Fields in mgui.pipelines with type parameters of type InterfacePipeline

Modifier and Type	Field	Description
protected java.util.LinkedList<InterfacePipeline>	PipelineFork.pipelines

Methods in mgui.pipelines that return InterfacePipeline

Modifier and Type	Method	Description
InterfacePipeline	DynamicPipelineEvent.getPipeline()
InterfacePipeline	InterfacePipeline.getPipeline()
InterfacePipeline	PipelineFork.getPipeline()
InterfacePipeline	PipelineProcessInstance.getPipeline()
abstract InterfacePipeline	PipelineTask.getPipeline()

Methods in mgui.pipelines that return types with arguments of type InterfacePipeline

Modifier and Type	Method	Description
java.util.ArrayList<InterfacePipeline>	PipelineFork.getPipelines()
java.util.LinkedList<InterfacePipeline>	PipelineFork.getTasks()

Methods in mgui.pipelines with parameters of type InterfacePipeline

Modifier and Type	Method	Description
int	PipelineFork.getPipelineIndex(InterfacePipeline pipe)
void	PipelineFork.insert(int index, InterfacePipeline pipe)
static boolean	PipelineFunctions.launchPipelineAsJob(InterfacePipeline pipeline, boolean blocking)
void	PipelineFork.push(InterfacePipeline pipe)
void	PipelineFork.remove(InterfacePipeline pipe)
void	PipelineFork.setOutputPipeline(InterfacePipeline output_pipe)
void	InterfacePipeline.setPipeline(InterfacePipeline pipeline)
void	PipelineFork.setPipeline(InterfacePipeline pipeline)
void	PipelineProcessInstance.setPipeline(InterfacePipeline pipeline)
abstract void	PipelineTask.setPipeline(InterfacePipeline pipeline)

Constructors in mgui.pipelines with parameters of type InterfacePipeline

Constructor	Description
DynamicPipelineEvent(InterfacePipeline pipeline)
PipelineFork(java.lang.String name, boolean launch_parallel, java.util.Collection<InterfacePipeline> tasks, InterfacePipeline output_pipe)
PipelineLauncher(InterfacePipeline pipeline)
PipelineLauncher(InterfacePipeline pipeline, java.lang.String instance, InterfaceProject project)
PipelineState(InterfacePipeline pipeline)	Construct a new pipeline state for the given pipeline.

Constructor parameters in mgui.pipelines with type arguments of type InterfacePipeline

Constructor	Description
PipelineFork(java.lang.String name, boolean launch_parallel, java.util.Collection<InterfacePipeline> tasks)
PipelineFork(java.lang.String name, boolean launch_parallel, java.util.Collection<InterfacePipeline> tasks, InterfacePipeline output_pipe)