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N

n - Variable in class mgui.geometry.Mesh3D
n - Variable in class mgui.geometry.PointSet2D
n - Variable in class mgui.geometry.PointSet3D
n - Variable in class mgui.geometry.Polygon3D
n_count - Variable in class mgui.io.foreign.trackvis.TrackVisTractHeader
n_faces - Variable in class mgui.io.foreign.duff.DuffSurfaceHeader
n_nodes - Variable in class mgui.geometry.neuro.mesh.ScalpAndSkullModelOptions
n_nodes - Variable in class mgui.io.foreign.duff.DuffSurfaceHeader
n_properties - Variable in class mgui.io.foreign.trackvis.TrackVisTractHeader
n_scalars - Variable in class mgui.io.foreign.trackvis.TrackVisTractHeader
n_strips - Variable in class mgui.io.foreign.duff.DuffSurfaceHeader
name - Variable in class mgui.datasources.DataSourceDriver
name - Variable in class mgui.datasources.DataType
name - Variable in class mgui.geometry.util.NodeShape
name - Variable in class mgui.interfaces.attributes.Attribute
name - Variable in class mgui.interfaces.graphics.video.VideoTaskType
name - Variable in class mgui.interfaces.graphs.InterfaceAbstractGraph
name - Variable in class mgui.interfaces.io.InterfaceIOType
name - Variable in class mgui.interfaces.maps.ColourMap
name - Variable in class mgui.interfaces.neuro.InterfaceNeuroAtlas
name - Variable in class mgui.interfaces.queries.InterfaceQuery
name - Variable in class mgui.interfaces.shapes.datasources.DataSourceLinkOptions
name - Variable in class mgui.interfaces.shapes.Shape2DSelectionSet
name - Variable in class mgui.interfaces.tools.graphics.Tool2D
name - Variable in class mgui.interfaces.tools.graphics.Tool3D
name - Variable in class mgui.interfaces.tools.graphs.ToolGraph
name - Variable in class mgui.interfaces.tools.shapes.ToolCreateMeshFromPolylinesOptions
name - Variable in class mgui.interfaces.tools.shapes.ToolGetConvexHull2DOptions
name - Variable in class mgui.interfaces.tools.shapes.ToolGetMeshIntersectionPolylinesOptions
name - Variable in class mgui.io.domestic.network.CorticalNetworkMatrixInOptions
name - Variable in class mgui.io.domestic.shapes.VolumeInputOptions
name - Variable in class mgui.neuro.imaging.camino.CaminoProject
name - Variable in class mgui.pipelines.PipelineJob
name - Variable in class mgui.pipelines.PipelineProcess
name - Variable in class mgui.pipelines.TaskParameter
name - Variable in class mgui.pipelines.TaskParameterInstance
name - Variable in class mgui.util.ScaledUnit
name_map - Variable in class mgui.interfaces.neuro.InterfaceNeuroAtlas
name_map - Variable in class mgui.io.foreign.wunil.WunilDataset
name_map_prefix - Variable in class mgui.io.foreign.caret.CaretPaintInOptions
name_transformer - Variable in class mgui.interfaces.gui.InterfaceComboBox
name_transformer - Variable in class mgui.interfaces.gui.InterfaceComboBoxRenderer
NameChanged - mgui.datasources.DataFieldEvent.EventCode
NameChanged - mgui.interfaces.shapes.ShapeModelEvent.EventType
NameChanged - mgui.interfaces.shapes.VertexDataColumnEvent.EventType
NamedDataSource - Interface in mgui.interfaces.io: Interface for a data source with named channels.
NamedIcon - Class in mgui.resources.icons: Specifies a named icon.
NamedIcon(String, Icon) - Constructor for class mgui.resources.icons.NamedIcon
NamedObject - Interface in mgui.interfaces: Interface for all objects which specify a name.
nameMap - Variable in class mgui.interfaces.maps.DiscreteColourMap
nameMap - Variable in class mgui.interfaces.shapes.mesh.MeshDataMaskOptions
nameMap - Variable in class mgui.io.foreign.caret.CaretAreaColourInOptions
nameMap - Variable in class mgui.io.foreign.caret.CaretAreaColourLoader
nameMap - Variable in class mgui.io.foreign.caret.CaretPaintLoader.Header
NameMap - Class in mgui.interfaces.maps: Associates a name with an integer.
NameMap() - Constructor for class mgui.interfaces.maps.NameMap
NameMap(String) - Constructor for class mgui.interfaces.maps.NameMap
NameMap(String, boolean) - Constructor for class mgui.interfaces.maps.NameMap: Instantiate this name map.
NameMapInOptions - Class in mgui.io.domestic.maps
NameMapInOptions() - Constructor for class mgui.io.domestic.maps.NameMapInOptions
NameMapLoader - Class in mgui.io.domestic.maps: Reads a name map from file.
NameMapLoader() - Constructor for class mgui.io.domestic.maps.NameMapLoader
NameMapLoader(File) - Constructor for class mgui.io.domestic.maps.NameMapLoader
NameMapLoader(File, NameMapLoader.Format) - Constructor for class mgui.io.domestic.maps.NameMapLoader
NameMapLoader.Format - Enum in mgui.io.domestic.maps
NameMapOutDialogBox - Class in mgui.io.domestic.maps
NameMapOutDialogBox() - Constructor for class mgui.io.domestic.maps.NameMapOutDialogBox
NameMapOutDialogBox(JFrame, InterfaceIOPanel, InterfaceIOOptions) - Constructor for class mgui.io.domestic.maps.NameMapOutDialogBox
NameMapOutDialogBox.TableModel - Class in mgui.io.domestic.maps
NameMapOutOptions - Class in mgui.io.domestic.maps: Specifies options for writing a name map (or multiple name maps) to file.
NameMapOutOptions() - Constructor for class mgui.io.domestic.maps.NameMapOutOptions
nameMaps - Variable in class mgui.interfaces.shapes.PointSet2DInt
NameMapTable - Class in mgui.interfaces.maps
NameMapTable() - Constructor for class mgui.interfaces.maps.NameMapTable
NameMapTable(NameMap) - Constructor for class mgui.interfaces.maps.NameMapTable
NameMapWriter - Class in mgui.io.domestic.maps: Writes a name map to an delimited ASCII file.
NameMapWriter() - Constructor for class mgui.io.domestic.maps.NameMapWriter
NameMapWriter(File) - Constructor for class mgui.io.domestic.maps.NameMapWriter
NameMapXMLHandler - Class in mgui.io.domestic.maps: XML (SAX) handler for a name map XML file.
NameMapXMLHandler() - Constructor for class mgui.io.domestic.maps.NameMapXMLHandler
names - Variable in class mgui.interfaces.maps.NameMap
names - Variable in class mgui.io.domestic.datasources.ExportDataTableOptions
names - Variable in class mgui.io.domestic.graphs.GraphInputOptions
names - Variable in class mgui.io.domestic.graphs.GraphOutputOptions
names - Variable in class mgui.io.domestic.maps.DiscreteColourMapInOptions
names - Variable in class mgui.io.domestic.maps.NameMapInOptions
names - Variable in class mgui.io.domestic.maps.NameMapOutOptions
names - Variable in class mgui.io.domestic.network.CorticalNetworkMatrixInOptions
names - Variable in class mgui.io.domestic.shapes.Graph3DOutputOptions
names - Variable in class mgui.io.domestic.shapes.PointSet2DInputOptions
names - Variable in class mgui.io.domestic.shapes.PointSet3DDataInputOptions
names - Variable in class mgui.io.domestic.shapes.PointSet3DInputOptions
names - Variable in class mgui.io.domestic.shapes.PolygonSet3DInputOptions
names - Variable in class mgui.io.domestic.shapes.ShapeDataInputOptions
names - Variable in class mgui.io.domestic.shapes.ShapeInputOptions
names - Variable in class mgui.io.domestic.shapes.SurfaceDataInputOptions
names - Variable in class mgui.io.domestic.shapes.SurfaceInputOptions
names - Variable in class mgui.io.domestic.shapes.VectorSet3DInputOptions
names - Variable in class mgui.io.domestic.shapes.VolumeInputOptions
names - Variable in class mgui.io.domestic.variables.MatrixInOptions
names - Variable in class mgui.io.domestic.variables.StringVectorInOptions
names - Variable in class mgui.io.standard.xml.x3d.Vector3DInputOptions
names - Variable in class mgui.models.environments.AbstractEnvironmentDataSource
NativeProcess - Class in mgui.pipelines: Represents a native process; i.e., one which runs from the OS command console.
NativeProcess(String, String) - Constructor for class mgui.pipelines.NativeProcess
NativeProcess(String, String, String) - Constructor for class mgui.pipelines.NativeProcess
NativeProcess(String, String, String, String) - Constructor for class mgui.pipelines.NativeProcess
NativeProcess(String, String, String, String, String) - Constructor for class mgui.pipelines.NativeProcess
NativeProcess(PipelineProcess) - Constructor for class mgui.pipelines.NativeProcess
needs_regen - Variable in class mgui.interfaces.graphics.InterfaceGraphic2D
needs_update - Variable in class mgui.interfaces.graphics.InterfaceGraphic2D
needsRedraw(Attribute) - Method in class mgui.interfaces.shapes.Ellipse2DInt
needsRedraw(Attribute) - Method in class mgui.interfaces.shapes.selection.ShapeSelectionSet
needsRedraw(Attribute<?>) - Method in class mgui.interfaces.graphics.InterfaceGraphic2D
needsRedraw(Attribute<?>) - Method in class mgui.interfaces.shapes.InterfaceShape: Returns true if a change to attribute will require a redraw of this shape.
needsRedraw(Attribute<?>) - Method in class mgui.interfaces.shapes.Mesh2DInt
needsRedraw(Attribute<?>) - Method in class mgui.interfaces.shapes.Mesh3DInt
needsRedraw(Attribute<?>) - Method in class mgui.interfaces.shapes.PointSet2DInt
needsRedraw(Attribute<?>) - Method in class mgui.interfaces.shapes.PointSet3DInt
needsRedraw(Attribute<?>) - Method in class mgui.interfaces.shapes.SectionSet3DInt
needsRedraw(Attribute<?>) - Method in class mgui.interfaces.shapes.Shape2DInt
needsRedraw(Attribute<?>) - Method in class mgui.interfaces.shapes.Shape3DInt
needsRedraw2D - Variable in class mgui.interfaces.shapes.attributes.ShapeAttribute
needsRedraw2D() - Method in class mgui.interfaces.shapes.attributes.ShapeAttribute: Indicates whether a change to this attribute's value requires a 2D redraw of the shape.
needsRedraw2D(boolean) - Method in class mgui.interfaces.shapes.attributes.ShapeAttribute: Sets whether a change to this attribute's value requires a 2D redraw of the shape.
needsRedraw3D - Variable in class mgui.interfaces.shapes.attributes.ShapeAttribute
needsRedraw3D() - Method in class mgui.interfaces.shapes.attributes.ShapeAttribute: Indicates whether a change to this attribute's value requires a 3D redraw of the shape.
needsRedraw3D(boolean) - Method in class mgui.interfaces.shapes.attributes.ShapeAttribute: Sets whether a change to this attribute's value requires a 3D redraw of the shape.
needsRedraw3D(Attribute) - Method in class mgui.interfaces.shapes.PolygonSet3DInt
needsRedraw3D(Attribute) - Method in class mgui.interfaces.shapes.ShapeSet3DInt
needsRedraw3D(Attribute) - Method in class mgui.interfaces.shapes.VectorSet3DInt
Neighbourhood - Class in mgui.geometry.mesh: Represents a 1-ring neighbourhood in a mesh.
Neighbourhood(int) - Constructor for class mgui.geometry.mesh.Neighbourhood
Neighbourhood(int, List<Integer>) - Constructor for class mgui.geometry.mesh.Neighbourhood
NeighbourhoodMesh - Class in mgui.geometry.mesh: Constructs a list of node neighbourhoods, i.e., for each node lists its neighbours.
NeighbourhoodMesh(Mesh3D) - Constructor for class mgui.geometry.mesh.NeighbourhoodMesh
neighbourhoods - Variable in class mgui.geometry.mesh.NeighbourhoodMesh
neighbours - Variable in class mgui.geometry.mesh.Neighbourhood
network - Variable in class mgui.neuro.graphs.CorticalNetworkGraph
network - Variable in class mgui.neuro.graphs.NeuralNetGraph
NetworkComponentEvent - Class in mgui.models.networks.components
NetworkComponentEvent(AbstractNetworkComponent, int) - Constructor for class mgui.models.networks.components.NetworkComponentEvent
NetworkEvent - Class in mgui.models.networks
NetworkEvent(AbstractNetwork, int) - Constructor for class mgui.models.networks.NetworkEvent
NetworkException - Exception in mgui.models.networks
NetworkException(String) - Constructor for exception mgui.models.networks.NetworkException
NetworkGraphElement - Interface in mgui.graphs.networks: Identifies subclasses as elements in a network graph.
NetworkGraphEvent - Class in mgui.graphs.networks
NetworkGraphEvent(NetworkGraphElement) - Constructor for class mgui.graphs.networks.NetworkGraphEvent
NetworkGraphListener - Interface in mgui.graphs.networks
NetworkListener - Interface in mgui.models.networks
networkUpdated(NeuralNetEvent) - Method in interface mgui.interfaces.neuro.InterfaceNeuralNetListener
networkUpdated(NetworkEvent) - Method in class mgui.interfaces.neuro.InterfaceNetworkTreeNode
networkUpdated(NetworkEvent) - Method in interface mgui.models.networks.NetworkListener
networkUpdated(NetworkEvent) - Method in class mgui.neuro.graphs.CorticalNetworkGraph
networkUpdated(NetworkEvent) - Method in class mgui.neuro.graphs.NeuralNetGraph
NeuralNetConnection - Class in mgui.neuro.graphs
NeuralNetConnection(NeuralNetNode, NeuralNetNode) - Constructor for class mgui.neuro.graphs.NeuralNetConnection
NeuralNetEvent - Class in mgui.interfaces.neuro
NeuralNetEvent(AbstractNeuralNet, int) - Constructor for class mgui.interfaces.neuro.NeuralNetEvent
NeuralNetGraph - Class in mgui.neuro.graphs: Extension of JUNG's DirectedSparseGraph designed to specifically represent instances of NeuralNet.
NeuralNetGraph() - Constructor for class mgui.neuro.graphs.NeuralNetGraph
NeuralNetGraph(AbstractNeuralNet) - Constructor for class mgui.neuro.graphs.NeuralNetGraph
NeuralNetNode - Class in mgui.neuro.graphs: Extension of DirectedSparseVertex to specifically represent nodes in neural networks, i.e., containing references to instances of Neuron.
NeuralNetNode(AbstractNeuron) - Constructor for class mgui.neuro.graphs.NeuralNetNode
NeuroComponentEvent - Class in mgui.interfaces.neuro
NeuroComponentEvent(AbstractNeuroComponent, int) - Constructor for class mgui.interfaces.neuro.NeuroComponentEvent
NeuroConnectivityFunctions - Class in mgui.geometry.neuro.connectivity: Utility class providing functions for determining neural connectivity from geometry.
NeuroConnectivityFunctions() - Constructor for class mgui.geometry.neuro.connectivity.NeuroConnectivityFunctions
NeuroException - Exception in mgui.neuro.exceptions: Default exception for dynamic neuro model execution
NeuroException(String) - Constructor for exception mgui.neuro.exceptions.NeuroException
NeuroMeshEngine - Class in mgui.geometry.neuro.mesh: Engine for performing functions on cortical surfaces and other objects.
NeuroMeshEngine() - Constructor for class mgui.geometry.neuro.mesh.NeuroMeshEngine
NeuroMeshFunctions - Class in mgui.geometry.neuro.mesh: Utility class for mesh functions related to neuroscience applications.
NeuroMeshFunctions() - Constructor for class mgui.geometry.neuro.mesh.NeuroMeshFunctions
NeuroMeshFunctionsException - Exception in mgui.geometry.neuro.mesh
NeuroMeshFunctionsException(String) - Constructor for exception mgui.geometry.neuro.mesh.NeuroMeshFunctionsException
NeuroMeshOptionsDialog - Class in mgui.interfaces.shapes.neuro
NeuroMeshOptionsDialog() - Constructor for class mgui.interfaces.shapes.neuro.NeuroMeshOptionsDialog
NeuroMeshOptionsDialog(JFrame, ScalpAndSkullModelOptions) - Constructor for class mgui.interfaces.shapes.neuro.NeuroMeshOptionsDialog
Neuron - Interface in mgui.neuro.components
NeuronalCompartmentalComponent - Class in mgui.neuro.components.compartments
NeuronalCompartmentalComponent() - Constructor for class mgui.neuro.components.compartments.NeuronalCompartmentalComponent
NeuronalComponent - Interface in mgui.neuro.components
NeuroNetException - Exception in mgui.neuro.exceptions
NeuroNetException(String) - Constructor for exception mgui.neuro.exceptions.NeuroNetException
new_plot - Variable in class mgui.interfaces.plots.NewPlotDialog
NEW_PROJECT - Static variable in class mgui.interfaces.projects.InterfaceProjectPanel
new_shape_set - Variable in class mgui.io.domestic.shapes.PolygonSet3DInputOptions
new_shape_set_name - Variable in class mgui.io.domestic.shapes.PolygonSet3DInputOptions
NEW_SOURCE - Static variable in class mgui.interfaces.datasources.InterfaceDatasourcePanel: CONSTANTS
newArray - Variable in class mgui.interfaces.shapes.NodesUpdater
newMap(MappedPolygon2D) - Method in class mgui.morph.sections.MappedPolygon2DPath: Method adds a map to this path's buffer.
NewPlotDialog - Class in mgui.interfaces.plots: General dialog box for generation a new plot object.
NewPlotDialog() - Constructor for class mgui.interfaces.plots.NewPlotDialog
NewPlotDialog(JFrame) - Constructor for class mgui.interfaces.plots.NewPlotDialog
NewSource - mgui.interfaces.graphics.GraphicEvent.EventType
NewSource - mgui.interfaces.graphics.WindowEvent.EventType
newVertexData(DataType) - Method in class mgui.interfaces.shapes.InterfaceShape: Returns a new array of the same size as this shape, with the specified data type
next - Variable in class au.edu.unsw.cse.AnimationWidget
next - Variable in class mgui.neuro.components.AbstractDendrite
next - Variable in class mgui.neuro.components.compartments.CompartmentalDendrite
next() - Method in class au.edu.unsw.cse.AnimationWidget
next() - Method in class au.edu.unsw.cse.AnimationWidgetVRML
next() - Method in class au.edu.unsw.cse.NumberStream: return the next double from the stream.
next() - Method in class mgui.interfaces.shapes.util.SectionSetIterator
next() - Method in class mgui.morph.sections.util.MorphSectionSetIterator
nextBytes(RandomAccessFile, DataType, boolean) - Static method in class mgui.io.util.IoFunctions
nextElement() - Method in class mgui.util.PowerfulTokenizer: Returns the next token from the input string.
nextElement() - Method in class mgui.util.QuotedStringTokenizer
nextIndex(int, int) - Method in class mgui.geometry.volume.TricubicSplineInterpolaterUpdater: Compute the next index of an array, clipping if necessary.
nextPt - Variable in class mgui.interfaces.tools.shapes.ToolCreateEllipse2D
nextPt - Variable in class mgui.interfaces.tools.shapes.ToolCreatePolygon2D
nextSect - Variable in class mgui.morph.sections.MappedPolygon2D
nextToken() - Method in class mgui.util.PowerfulTokenizer: Returns the next token from the input string.
nextToken() - Method in class mgui.util.QuotedStringTokenizer
nextToken(String) - Method in class mgui.util.QuotedStringTokenizer
NI1_EXT - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_FIRST_STATCODE - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_BETA - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_BINOM - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_CHI - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_CHISQ - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_CHISQ_NONC - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_CORREL - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_DISPVECT - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_ESTIMATE - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_EXTVAL - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_FTEST - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_FTEST_NONC - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_GAMMA - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_GENMATRIX - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_INVGAUSS - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_LABEL - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_LAPLACE - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_LOGISTIC - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_NEURONAME - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_NONE - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_NORMAL - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_POINTSET - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_POISSON - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_PVAL - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_QUATERNION - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_SYMMATRIX - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_TRIANGLE - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_TTEST - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_TTEST_NONC - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_UNIFORM - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_VECTOR - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_WEIBULL - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_INTENT_ZSCORE - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_LAST_STATCODE - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_SLICE_ALT_DEC - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_SLICE_ALT_INC - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_SLICE_SEQ_DEC - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_SLICE_SEQ_INC - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_COMPLEX128 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_COMPLEX256 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_COMPLEX64 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_FLOAT128 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_FLOAT32 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_FLOAT64 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_INT16 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_INT32 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_INT64 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_INT8 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_RGB24 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_UINT16 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_UINT32 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_UINT64 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_TYPE_UINT8 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_UNITS_HZ - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_UNITS_METER - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_UNITS_MICRON - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_UNITS_MM - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_UNITS_MSEC - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_UNITS_PPM - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_UNITS_SEC - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_UNITS_UNKNOWN - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_UNITS_USEC - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_XFORM_ALIGNED_ANAT - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_XFORM_MNI_152 - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_XFORM_SCANNER_ANAT - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_XFORM_TALAIRACH - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NIFTI_XFORM_UNKNOWN - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
Nifti1Dataset - Class in mgui.io.standard.nifti: Nifti1Dataset is an API for reading/writing nifti-1 datasets.
The definitive nifti-1 specification is the nifti1.h file on the NIfTI DFWG website
Nifti1Dataset() - Constructor for class mgui.io.standard.nifti.Nifti1Dataset: Constructor for creation of a new dataset.
Nifti1Dataset(String) - Constructor for class mgui.io.standard.nifti.Nifti1Dataset: Constructor for a dataset existing on disk.
NiftiFunctions - Class in mgui.io.standard.nifti.util
NiftiFunctions() - Constructor for class mgui.io.standard.nifti.util.NiftiFunctions
NiftiMetadata - Class in mgui.io.standard.nifti: Data structure to store header information for Analyze 7.5 format volume files.
NiftiMetadata() - Constructor for class mgui.io.standard.nifti.NiftiMetadata
NiftiMetadata(File) - Constructor for class mgui.io.standard.nifti.NiftiMetadata
NiftiVolumeLoader - Class in mgui.io.standard.nifti: File loader to read Analyze 7.5 format volume files.
NiftiVolumeLoader() - Constructor for class mgui.io.standard.nifti.NiftiVolumeLoader
NiftiVolumeLoader(File) - Constructor for class mgui.io.standard.nifti.NiftiVolumeLoader
NiftiVolumeLoader(File, boolean) - Constructor for class mgui.io.standard.nifti.NiftiVolumeLoader
NiftiVolumeWriter - Class in mgui.io.standard.nifti: Writer for Nifti-format volumes.
NiftiVolumeWriter() - Constructor for class mgui.io.standard.nifti.NiftiVolumeWriter
NiftiVolumeWriter(File) - Constructor for class mgui.io.standard.nifti.NiftiVolumeWriter
NII_HDR_SIZE - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
NII_MAGIC_STRING - Static variable in class mgui.io.standard.nifti.Nifti1Dataset
no_anchors - Variable in class mgui.io.domestic.maps.DiscreteColourMapInOptions
no_weight - Static variable in class mgui.geometry.neuro.mesh.NeuroMeshFunctions
node - Variable in class mgui.geometry.mesh.Neighbourhood
node_label_renderer - Variable in class mgui.interfaces.graphs.InterfaceGraphDisplay
node_map - Variable in class mgui.interfaces.shapes.graphs.Graph3DInt
node1 - Variable in class mgui.geometry.mesh.MeshEdge
node2 - Variable in class mgui.geometry.mesh.MeshEdge
NodeAdded - mgui.interfaces.trees.TreeEvent.EventType
NodeDestroyed - mgui.interfaces.trees.TreeEvent.EventType
NodeFactory() - Constructor for class mgui.interfaces.graphs.util.GraphFunctions.NodeFactory
NodeFactory(Class<T>) - Constructor for class mgui.interfaces.graphs.util.GraphFunctions.NodeFactory
NodeFactory(Class<T>, String, boolean, boolean) - Constructor for class mgui.interfaces.graphs.util.GraphFunctions.NodeFactory
NodeFactory(String) - Constructor for class mgui.interfaces.graphs.util.GraphFunctions.NodeFactory
NodeFactory(String, boolean, boolean) - Constructor for class mgui.interfaces.graphs.util.GraphFunctions.NodeFactory
nodeForRow(int) - Method in class mgui.interfaces.trees.TreeTableModelAdapter
nodeHasChild(BranchGroup, Node) - Static method in class mgui.interfaces.shapes.util.ShapeFunctions: Determines whether child is a child of parent in the Scene Graph
NodeInserted - mgui.interfaces.trees.TreeEvent.EventType
nodeListener - Variable in class mgui.interfaces.shapes.Shape2DInt
nodeListener - Variable in class mgui.interfaces.shapes.Shape3DInt
NodeMap2D - Class in mgui.morph.sections: Provides a mapping from a node to a set of other nodes.
NodeMap2D() - Constructor for class mgui.morph.sections.NodeMap2D
NodeMap2D(AttributeNode2D) - Constructor for class mgui.morph.sections.NodeMap2D
NodeMapComparator - Class in mgui.morph.sections
NodeMapComparator() - Constructor for class mgui.morph.sections.NodeMapComparator
NodeModified - mgui.interfaces.trees.TreeEvent.EventType
NodeObjectChanged - mgui.interfaces.trees.TreeEvent.EventType
NodeRemoved - mgui.interfaces.trees.TreeEvent.EventType
nodes - Variable in class mgui.geometry.mesh.EnergySphere
nodes - Variable in class mgui.geometry.Mesh3D
nodes - Variable in class mgui.geometry.PointSet2D
nodes - Variable in class mgui.geometry.PointSet3D
nodes - Variable in class mgui.geometry.Polygon3D
nodes - Variable in class mgui.geometry.Rect3D
nodes - Variable in class mgui.interfaces.graphs.DefaultGraph
nodes - Variable in class mgui.io.foreign.caret.CaretMetricLoader.Header
nodes - Variable in class mgui.io.foreign.caret.CaretPaintLoader.Header
nodes - Variable in class mgui.morph.sections.NodeMap2D
NodeShape - Class in mgui.geometry.util: Wraps a java.awt.geom.Shape used to render graph or 2D shape nodes.
NodeShape() - Constructor for class mgui.geometry.util.NodeShape
NodeShape(String, Shape, boolean) - Constructor for class mgui.geometry.util.NodeShape
NodeShape(String, ArrayList<Shape>, boolean) - Constructor for class mgui.geometry.util.NodeShape
NodeShapeComboRenderer - Class in mgui.geometry.util: Extends InterfaceComboBoxRenderer to allow rendering of node shapes.
NodeShapeComboRenderer() - Constructor for class mgui.geometry.util.NodeShapeComboRenderer
NodeShapeComboRenderer(boolean, Color) - Constructor for class mgui.geometry.util.NodeShapeComboRenderer
NodesUpdater - Class in mgui.interfaces.shapes
NodesUpdater(Shape3DInt) - Constructor for class mgui.interfaces.shapes.NodesUpdater
NodeVisibility(boolean) - Constructor for class mgui.interfaces.graphs.util.GraphFunctions.NodeVisibility
NodeWillBeModified - mgui.interfaces.trees.TreeEvent.EventType
noDivisions - Variable in class mgui.interfaces.maps.ContinuousColourBar
None - mgui.interfaces.logs.LoggingTarget
None - mgui.io.standard.xml.svg.SVGInputOptions.SVGMap
NonPrivateDefaultTreeCellRenderer - Class in mgui.interfaces.attributes.tree: Displays an entry in a tree.
NonPrivateDefaultTreeCellRenderer() - Constructor for class mgui.interfaces.attributes.tree.NonPrivateDefaultTreeCellRenderer: Returns a new instance of DefaultTreeCellRenderer.
norm() - Method in class au.edu.unsw.cse.Quaternion
Normal - mgui.interfaces.xml.XMLObject.XMLType
normal_weight - Static variable in class mgui.geometry.neuro.mesh.NeuroMeshFunctions
normalize() - Method in class au.edu.unsw.cse.Point3d
normalize(double, double, double) - Static method in class mgui.util.MathFunctions: Normalize val to the range [min:max].
normalize(MguiNumber, double, double) - Method in class mgui.interfaces.maps.ContinuousColourMap
normalizeColumn(InterfaceShape, ProgressUpdater) - Method in class mgui.interfaces.shapes.util.ShapeEngine: Normalizes the values in a column.
normalizeColumnWithMask(InterfaceShape, ProgressUpdater) - Method in class mgui.interfaces.shapes.util.ShapeEngine: Normalize values in source_column by the statistic of values in normalize_column which lie in the mask mask_column.
normalized - Variable in class mgui.io.domestic.maps.DiscreteColourMapInOptions
normalizeWeights - Variable in class mgui.io.domestic.network.CorticalNetworkMatrixInOptions
normalLine - Variable in class mgui.interfaces.maps.ContinuousColourBar
normals - Variable in class mgui.io.foreign.duff.DuffSurfaceHeader
NoSuchTypeException - Exception in mgui.interfaces.maps
NoSuchTypeException(int) - Constructor for exception mgui.interfaces.maps.NoSuchTypeException
NoSuchTypeException(String) - Constructor for exception mgui.interfaces.maps.NoSuchTypeException
notifyListeners - Variable in class mgui.interfaces.shapes.InterfaceShape: LOCAL VARIABLES
NotStarted - mgui.command.CommandFunctions.ProcessState
NotStarted - mgui.pipelines.PipelineTask.Status
nullColour - Variable in class mgui.interfaces.maps.ColourMap
number_format - Variable in class mgui.io.domestic.shapes.SurfaceFileWriter
number_format - Variable in class mgui.io.domestic.shapes.SurfaceOutputOptions
number_format - Variable in class mgui.io.domestic.variables.MatrixFileWriter
number_format - Variable in class mgui.io.foreign.minc.MincSurfaceDataWriter
number_of_numbers - Variable in class mgui.io.standard.xml.svg.Instruction
NumberFunctions - Class in mgui.numbers
NumberFunctions() - Constructor for class mgui.numbers.NumberFunctions
numbers - Variable in class mgui.io.standard.xml.svg.Instruction
NumberStream - Class in au.edu.unsw.cse: This class provides a convenient way to read numbers from a text file
NumberStream(InputStream) - Constructor for class au.edu.unsw.cse.NumberStream: Creates a NumberStream that parses the specified input stream.
NumberStream(Reader) - Constructor for class au.edu.unsw.cse.NumberStream: Creates a NumberStream that parses the specified character stream.
numFormat - Static variable in class mgui.io.foreign.vol.Attr

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